Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ttc3O88196 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ttc3O88196 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.48■□□□□ 0.55
Ttc3O88196 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.48■□□□□ 0.55
Ttc3O88196 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ttc3O88196 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ttc3O88196 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ttc3O88196 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ttc3O88196 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ttc3O88196 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ttc3O88196 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ttc3O88196 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Ttc3O88196 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ttc3O88196 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ttc3O88196 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ttc3O88196 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ttc3O88196 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.47■□□□□ 0.55
Ttc3O88196 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Ttc3O88196 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ttc3O88196 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.47■□□□□ 0.55
Ttc3O88196 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.47■□□□□ 0.55
Ttc3O88196 AA414768-201ENSMUST00000121924 1257 ntBASIC18.46■□□□□ 0.55
Ttc3O88196 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ttc3O88196 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.46■□□□□ 0.55
Ttc3O88196 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.46■□□□□ 0.55
Ttc3O88196 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ttc3O88196 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ttc3O88196 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.46■□□□□ 0.55
Ttc3O88196 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ttc3O88196 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ttc3O88196 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ttc3O88196 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ttc3O88196 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.46■□□□□ 0.55
Ttc3O88196 Gm17661-201ENSMUST00000170317 270 ntBASIC18.46■□□□□ 0.55
Ttc3O88196 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.46■□□□□ 0.55
Ttc3O88196 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ttc3O88196 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ttc3O88196 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ttc3O88196 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ttc3O88196 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ttc3O88196 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ttc3O88196 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ttc3O88196 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.45■□□□□ 0.54
Ttc3O88196 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ttc3O88196 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Ttc3O88196 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Ttc3O88196 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ttc3O88196 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ttc3O88196 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ttc3O88196 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc3O88196 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Ttc3O88196 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc3O88196 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.44■□□□□ 0.54
Ttc3O88196 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc3O88196 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.44■□□□□ 0.54
Ttc3O88196 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc3O88196 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ttc3O88196 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc3O88196 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc3O88196 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc3O88196 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc3O88196 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc3O88196 Il3ra-202ENSMUST00000223589 738 ntBASIC18.44■□□□□ 0.54
Ttc3O88196 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc3O88196 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc3O88196 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc3O88196 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ttc3O88196 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ttc3O88196 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ttc3O88196 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.43■□□□□ 0.54
Ttc3O88196 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.43■□□□□ 0.54
Ttc3O88196 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ttc3O88196 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ttc3O88196 Mir1668-201ENSMUST00000184114 107 ntBASIC18.43■□□□□ 0.54
Ttc3O88196 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.43■□□□□ 0.54
Ttc3O88196 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ttc3O88196 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ttc3O88196 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ttc3O88196 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ttc3O88196 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ttc3O88196 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ttc3O88196 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ttc3O88196 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ttc3O88196 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.43■□□□□ 0.54
Ttc3O88196 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.42■□□□□ 0.54
Ttc3O88196 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ttc3O88196 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
Ttc3O88196 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ttc3O88196 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ttc3O88196 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ttc3O88196 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ttc3O88196 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.42■□□□□ 0.54
Ttc3O88196 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.42■□□□□ 0.54
Ttc3O88196 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.42■□□□□ 0.54
Ttc3O88196 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ttc3O88196 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ttc3O88196 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ttc3O88196 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ttc3O88196 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ttc3O88196 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms