Protein–RNA interactions for Protein: O70491

Stra6, Receptor for retinol uptake STRA6, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6O70491 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Stra6O70491 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Stra6O70491 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Stra6O70491 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Stra6O70491 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Stra6O70491 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Stra6O70491 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Stra6O70491 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Stra6O70491 Gm22697-201ENSMUST00000175194 63 ntBASIC19.47■□□□□ 0.71
Stra6O70491 Gm6345-202ENSMUST00000180900 204 ntBASIC19.47■□□□□ 0.71
Stra6O70491 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Stra6O70491 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Stra6O70491 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Stra6O70491 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Stra6O70491 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Stra6O70491 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Stra6O70491 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Stra6O70491 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Stra6O70491 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Stra6O70491 Gm7370-201ENSMUST00000219471 767 ntBASIC19.46■□□□□ 0.71
Stra6O70491 Gm7367-201ENSMUST00000057611 492 ntBASIC19.46■□□□□ 0.71
Stra6O70491 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Stra6O70491 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Stra6O70491 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Stra6O70491 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Stra6O70491 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.46■□□□□ 0.71
Stra6O70491 Idnk-204ENSMUST00000226010 1898 ntBASIC19.45■□□□□ 0.7
Stra6O70491 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Stra6O70491 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stra6O70491 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Stra6O70491 AA414768-201ENSMUST00000121924 1257 ntBASIC19.45■□□□□ 0.7
Stra6O70491 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stra6O70491 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Stra6O70491 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stra6O70491 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stra6O70491 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Stra6O70491 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Stra6O70491 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Stra6O70491 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stra6O70491 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stra6O70491 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Stra6O70491 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stra6O70491 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stra6O70491 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Stra6O70491 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Stra6O70491 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Stra6O70491 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
Stra6O70491 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Stra6O70491 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stra6O70491 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stra6O70491 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Stra6O70491 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Stra6O70491 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stra6O70491 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stra6O70491 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stra6O70491 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stra6O70491 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stra6O70491 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stra6O70491 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Stra6O70491 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stra6O70491 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Stra6O70491 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Stra6O70491 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Stra6O70491 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.43■□□□□ 0.7
Stra6O70491 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Stra6O70491 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.43■□□□□ 0.7
Stra6O70491 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stra6O70491 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Stra6O70491 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stra6O70491 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Stra6O70491 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.42■□□□□ 0.7
Stra6O70491 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
Stra6O70491 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Stra6O70491 Gm16061-201ENSMUST00000122167 857 ntBASIC19.42■□□□□ 0.7
Stra6O70491 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.42■□□□□ 0.7
Stra6O70491 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Stra6O70491 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Stra6O70491 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stra6O70491 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Stra6O70491 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Stra6O70491 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Stra6O70491 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Stra6O70491 Gm18101-201ENSMUST00000215769 548 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms