Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim1O70400 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim1O70400 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim1O70400 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim1O70400 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim1O70400 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.35■□□□□ 0.37
Pdlim1O70400 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.35■□□□□ 0.37
Pdlim1O70400 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim1O70400 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim1O70400 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim1O70400 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim1O70400 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pdlim1O70400 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim1O70400 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim1O70400 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim1O70400 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.35■□□□□ 0.37
Pdlim1O70400 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim1O70400 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim1O70400 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim1O70400 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim1O70400 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pdlim1O70400 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pdlim1O70400 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim1O70400 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim1O70400 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.34■□□□□ 0.37
Pdlim1O70400 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim1O70400 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim1O70400 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim1O70400 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdlim1O70400 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdlim1O70400 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdlim1O70400 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pdlim1O70400 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdlim1O70400 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim1O70400 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim1O70400 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim1O70400 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.33■□□□□ 0.36
Pdlim1O70400 Gm715-201ENSMUST00000117865 831 ntBASIC17.33■□□□□ 0.36
Pdlim1O70400 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.33■□□□□ 0.36
Pdlim1O70400 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.33■□□□□ 0.36
Pdlim1O70400 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim1O70400 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.33■□□□□ 0.36
Pdlim1O70400 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.33■□□□□ 0.36
Pdlim1O70400 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim1O70400 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pdlim1O70400 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim1O70400 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim1O70400 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim1O70400 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim1O70400 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim1O70400 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pdlim1O70400 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim1O70400 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Pdlim1O70400 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim1O70400 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.32■□□□□ 0.36
Pdlim1O70400 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim1O70400 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim1O70400 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim1O70400 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Pdlim1O70400 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim1O70400 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.32■□□□□ 0.36
Pdlim1O70400 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pdlim1O70400 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pdlim1O70400 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pdlim1O70400 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim1O70400 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim1O70400 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.31■□□□□ 0.36
Pdlim1O70400 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim1O70400 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.31■□□□□ 0.36
Pdlim1O70400 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim1O70400 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim1O70400 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim1O70400 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.31■□□□□ 0.36
Pdlim1O70400 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim1O70400 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Pdlim1O70400 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.31■□□□□ 0.36
Pdlim1O70400 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim1O70400 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pdlim1O70400 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Pdlim1O70400 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim1O70400 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim1O70400 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim1O70400 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim1O70400 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim1O70400 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim1O70400 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim1O70400 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim1O70400 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.3■□□□□ 0.36
Pdlim1O70400 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim1O70400 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pdlim1O70400 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Pdlim1O70400 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim1O70400 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim1O70400 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim1O70400 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim1O70400 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim1O70400 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim1O70400 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pdlim1O70400 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pdlim1O70400 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms