Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim3O70209 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim3O70209 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim3O70209 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim3O70209 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim3O70209 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim3O70209 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.97■□□□□ 0.15
Pdlim3O70209 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pdlim3O70209 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim3O70209 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim3O70209 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.96■□□□□ 0.15
Pdlim3O70209 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.96■□□□□ 0.15
Pdlim3O70209 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim3O70209 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Pdlim3O70209 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim3O70209 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim3O70209 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim3O70209 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.96■□□□□ 0.15
Pdlim3O70209 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.96■□□□□ 0.15
Pdlim3O70209 Gm42778-201ENSMUST00000199644 553 ntBASIC15.96■□□□□ 0.15
Pdlim3O70209 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim3O70209 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim3O70209 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim3O70209 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pdlim3O70209 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Pdlim3O70209 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pdlim3O70209 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Pdlim3O70209 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pdlim3O70209 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pdlim3O70209 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pdlim3O70209 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
Pdlim3O70209 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
Pdlim3O70209 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pdlim3O70209 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pdlim3O70209 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.95■□□□□ 0.14
Pdlim3O70209 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.95■□□□□ 0.14
Pdlim3O70209 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pdlim3O70209 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim3O70209 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim3O70209 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim3O70209 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim3O70209 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim3O70209 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.94■□□□□ 0.14
Pdlim3O70209 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim3O70209 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Pdlim3O70209 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
Pdlim3O70209 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim3O70209 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.94■□□□□ 0.14
Pdlim3O70209 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim3O70209 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Pdlim3O70209 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim3O70209 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim3O70209 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim3O70209 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim3O70209 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pdlim3O70209 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.94■□□□□ 0.14
Pdlim3O70209 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim3O70209 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim3O70209 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim3O70209 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.93■□□□□ 0.14
Pdlim3O70209 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim3O70209 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.93■□□□□ 0.14
Pdlim3O70209 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Pdlim3O70209 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim3O70209 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim3O70209 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim3O70209 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.93■□□□□ 0.14
Pdlim3O70209 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim3O70209 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim3O70209 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim3O70209 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim3O70209 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pdlim3O70209 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim3O70209 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim3O70209 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim3O70209 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim3O70209 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim3O70209 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim3O70209 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim3O70209 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim3O70209 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.92■□□□□ 0.14
Pdlim3O70209 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms