Protein–RNA interactions for Protein: O70157

Top3a, DNA topoisomerase 3-alpha, mousemouse

Predictions only

Length 1,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top3aO70157 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Top3aO70157 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Top3aO70157 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top3aO70157 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.7■□□□□ 0.42
Top3aO70157 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.7■□□□□ 0.42
Top3aO70157 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top3aO70157 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Top3aO70157 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top3aO70157 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.7■□□□□ 0.42
Top3aO70157 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.7■□□□□ 0.42
Top3aO70157 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top3aO70157 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top3aO70157 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top3aO70157 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top3aO70157 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top3aO70157 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top3aO70157 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.7■□□□□ 0.42
Top3aO70157 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top3aO70157 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top3aO70157 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top3aO70157 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Top3aO70157 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top3aO70157 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top3aO70157 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Top3aO70157 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top3aO70157 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Top3aO70157 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.69■□□□□ 0.42
Top3aO70157 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.69■□□□□ 0.42
Top3aO70157 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.69■□□□□ 0.42
Top3aO70157 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.69■□□□□ 0.42
Top3aO70157 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Top3aO70157 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Top3aO70157 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top3aO70157 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.69■□□□□ 0.42
Top3aO70157 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Top3aO70157 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top3aO70157 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Top3aO70157 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top3aO70157 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Top3aO70157 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.69■□□□□ 0.42
Top3aO70157 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Top3aO70157 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top3aO70157 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top3aO70157 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Top3aO70157 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top3aO70157 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top3aO70157 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Top3aO70157 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top3aO70157 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Top3aO70157 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top3aO70157 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top3aO70157 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top3aO70157 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top3aO70157 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Top3aO70157 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top3aO70157 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top3aO70157 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top3aO70157 Flg-201ENSMUST00000050758 1488 ntBASIC17.68■□□□□ 0.42
Top3aO70157 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top3aO70157 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top3aO70157 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.68■□□□□ 0.42
Top3aO70157 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.67■□□□□ 0.42
Top3aO70157 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Top3aO70157 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top3aO70157 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.67■□□□□ 0.42
Top3aO70157 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Top3aO70157 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.67■□□□□ 0.42
Top3aO70157 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top3aO70157 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top3aO70157 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Top3aO70157 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top3aO70157 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top3aO70157 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top3aO70157 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top3aO70157 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top3aO70157 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top3aO70157 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.66■□□□□ 0.42
Top3aO70157 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top3aO70157 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.66■□□□□ 0.42
Top3aO70157 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top3aO70157 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top3aO70157 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.66■□□□□ 0.42
Top3aO70157 Gm38285-201ENSMUST00000192928 922 ntBASIC17.66■□□□□ 0.42
Top3aO70157 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.66■□□□□ 0.42
Top3aO70157 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top3aO70157 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top3aO70157 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top3aO70157 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Top3aO70157 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top3aO70157 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top3aO70157 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top3aO70157 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top3aO70157 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top3aO70157 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top3aO70157 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top3aO70157 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.66■□□□□ 0.42
Top3aO70157 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.66■□□□□ 0.42
Top3aO70157 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Top3aO70157 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Top3aO70157 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms