Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pja1O55176 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pja1O55176 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pja1O55176 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pja1O55176 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pja1O55176 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.61■□□□□ 0.57
Pja1O55176 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pja1O55176 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pja1O55176 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pja1O55176 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pja1O55176 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pja1O55176 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pja1O55176 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pja1O55176 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pja1O55176 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.6■□□□□ 0.57
Pja1O55176 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.6■□□□□ 0.57
Pja1O55176 Gm2399-201ENSMUST00000104944 225 ntBASIC18.6■□□□□ 0.57
Pja1O55176 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pja1O55176 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pja1O55176 Zfp783-201ENSMUST00000095946 670 ntBASIC18.6■□□□□ 0.57
Pja1O55176 Gm5874-201ENSMUST00000096101 508 ntBASIC18.6■□□□□ 0.57
Pja1O55176 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pja1O55176 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.6■□□□□ 0.57
Pja1O55176 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pja1O55176 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pja1O55176 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pja1O55176 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pja1O55176 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pja1O55176 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.59■□□□□ 0.57
Pja1O55176 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pja1O55176 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.59■□□□□ 0.57
Pja1O55176 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pja1O55176 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pja1O55176 Gm10849-201ENSMUST00000100397 618 ntBASIC18.59■□□□□ 0.57
Pja1O55176 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Pja1O55176 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pja1O55176 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pja1O55176 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pja1O55176 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.59■□□□□ 0.57
Pja1O55176 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.59■□□□□ 0.57
Pja1O55176 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pja1O55176 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pja1O55176 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pja1O55176 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pja1O55176 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pja1O55176 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pja1O55176 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pja1O55176 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pja1O55176 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pja1O55176 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pja1O55176 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pja1O55176 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pja1O55176 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pja1O55176 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pja1O55176 Gm6211-202ENSMUST00000167849 925 ntBASIC18.58■□□□□ 0.56
Pja1O55176 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pja1O55176 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pja1O55176 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pja1O55176 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.57■□□□□ 0.56
Pja1O55176 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pja1O55176 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pja1O55176 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pja1O55176 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pja1O55176 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pja1O55176 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pja1O55176 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pja1O55176 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pja1O55176 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pja1O55176 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.56■□□□□ 0.56
Pja1O55176 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pja1O55176 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pja1O55176 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pja1O55176 Gm7290-201ENSMUST00000104990 617 ntBASIC18.56■□□□□ 0.56
Pja1O55176 Gm12918-201ENSMUST00000120234 636 ntBASIC18.56■□□□□ 0.56
Pja1O55176 Gm15710-201ENSMUST00000121821 636 ntBASIC18.56■□□□□ 0.56
Pja1O55176 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pja1O55176 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pja1O55176 Gm5075-201ENSMUST00000196916 622 ntBASIC18.56■□□□□ 0.56
Pja1O55176 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.56■□□□□ 0.56
Pja1O55176 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.56■□□□□ 0.56
Pja1O55176 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.56■□□□□ 0.56
Pja1O55176 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pja1O55176 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pja1O55176 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.56■□□□□ 0.56
Pja1O55176 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pja1O55176 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pja1O55176 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pja1O55176 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pja1O55176 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pja1O55176 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.56■□□□□ 0.56
Pja1O55176 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pja1O55176 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pja1O55176 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pja1O55176 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.55■□□□□ 0.56
Pja1O55176 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pja1O55176 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Pja1O55176 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pja1O55176 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pja1O55176 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pja1O55176 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms