Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pde6dO55057 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pde6dO55057 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pde6dO55057 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pde6dO55057 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pde6dO55057 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pde6dO55057 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pde6dO55057 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Pde6dO55057 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.9□□□□□ -0.18
Pde6dO55057 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pde6dO55057 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Pde6dO55057 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Pde6dO55057 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pde6dO55057 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pde6dO55057 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pde6dO55057 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pde6dO55057 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pde6dO55057 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.9□□□□□ -0.18
Pde6dO55057 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pde6dO55057 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pde6dO55057 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.9□□□□□ -0.19
Pde6dO55057 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pde6dO55057 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pde6dO55057 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.89□□□□□ -0.19
Pde6dO55057 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.89□□□□□ -0.19
Pde6dO55057 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pde6dO55057 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pde6dO55057 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pde6dO55057 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pde6dO55057 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.89□□□□□ -0.19
Pde6dO55057 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pde6dO55057 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pde6dO55057 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pde6dO55057 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pde6dO55057 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pde6dO55057 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pde6dO55057 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pde6dO55057 Idnk-204ENSMUST00000226010 1898 ntBASIC13.89□□□□□ -0.19
Pde6dO55057 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pde6dO55057 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pde6dO55057 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pde6dO55057 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6dO55057 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6dO55057 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pde6dO55057 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6dO55057 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6dO55057 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Pde6dO55057 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6dO55057 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pde6dO55057 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6dO55057 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pde6dO55057 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.87□□□□□ -0.19
Pde6dO55057 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.87□□□□□ -0.19
Pde6dO55057 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.87□□□□□ -0.19
Pde6dO55057 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6dO55057 Gm27801-201ENSMUST00000184174 223 ntBASIC13.87□□□□□ -0.19
Pde6dO55057 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.87□□□□□ -0.19
Pde6dO55057 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.87□□□□□ -0.19
Pde6dO55057 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6dO55057 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6dO55057 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6dO55057 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6dO55057 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pde6dO55057 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6dO55057 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6dO55057 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.87□□□□□ -0.19
Pde6dO55057 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pde6dO55057 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.87□□□□□ -0.19
Pde6dO55057 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Pde6dO55057 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6dO55057 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6dO55057 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6dO55057 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6dO55057 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6dO55057 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6dO55057 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6dO55057 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6dO55057 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.86□□□□□ -0.19
Pde6dO55057 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6dO55057 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6dO55057 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pde6dO55057 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6dO55057 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms