Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl13O55038 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl13O55038 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl13O55038 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl13O55038 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl13O55038 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.89□□□□□ -0.03
Cxcl13O55038 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cxcl13O55038 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl13O55038 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl13O55038 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl13O55038 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.89□□□□□ -0.03
Cxcl13O55038 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl13O55038 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.89□□□□□ -0.03
Cxcl13O55038 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl13O55038 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Cxcl13O55038 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cxcl13O55038 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl13O55038 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl13O55038 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl13O55038 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Cxcl13O55038 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.89□□□□□ -0.03
Cxcl13O55038 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl13O55038 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl13O55038 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.88□□□□□ -0.03
Cxcl13O55038 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Cxcl13O55038 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 Gm2274-201ENSMUST00000184539 609 ntBASIC14.88□□□□□ -0.03
Cxcl13O55038 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cxcl13O55038 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cxcl13O55038 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.88□□□□□ -0.03
Cxcl13O55038 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.88□□□□□ -0.03
Cxcl13O55038 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl13O55038 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl13O55038 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cxcl13O55038 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl13O55038 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl13O55038 Gm7638-201ENSMUST00000121348 967 ntBASIC14.87□□□□□ -0.03
Cxcl13O55038 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.87□□□□□ -0.03
Cxcl13O55038 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl13O55038 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl13O55038 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.87□□□□□ -0.03
Cxcl13O55038 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl13O55038 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl13O55038 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl13O55038 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl13O55038 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Cxcl13O55038 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl13O55038 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl13O55038 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl13O55038 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl13O55038 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl13O55038 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl13O55038 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl13O55038 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl13O55038 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.86□□□□□ -0.03
Cxcl13O55038 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl13O55038 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl13O55038 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.86□□□□□ -0.03
Cxcl13O55038 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl13O55038 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl13O55038 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.86□□□□□ -0.03
Cxcl13O55038 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.86□□□□□ -0.03
Cxcl13O55038 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl13O55038 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl13O55038 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl13O55038 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl13O55038 Idnk-204ENSMUST00000226010 1898 ntBASIC14.86□□□□□ -0.03
Cxcl13O55038 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.86□□□□□ -0.03
Cxcl13O55038 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl13O55038 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl13O55038 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl13O55038 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Cxcl13O55038 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl13O55038 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.85□□□□□ -0.03
Cxcl13O55038 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl13O55038 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cxcl13O55038 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cxcl13O55038 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl13O55038 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms