Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ChkaO54804 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ChkaO54804 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ChkaO54804 Gm11927-201ENSMUST00000118472 759 ntBASIC17.77■□□□□ 0.44
ChkaO54804 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.77■□□□□ 0.44
ChkaO54804 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ChkaO54804 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
ChkaO54804 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ChkaO54804 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ChkaO54804 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ChkaO54804 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ChkaO54804 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ChkaO54804 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ChkaO54804 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ChkaO54804 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ChkaO54804 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ChkaO54804 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ChkaO54804 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ChkaO54804 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ChkaO54804 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ChkaO54804 Mir2861-201ENSMUST00000175539 82 ntBASIC17.76■□□□□ 0.43
ChkaO54804 Mtag2-201ENSMUST00000058665 714 ntBASIC17.76■□□□□ 0.43
ChkaO54804 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ChkaO54804 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ChkaO54804 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ChkaO54804 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ChkaO54804 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.76■□□□□ 0.43
ChkaO54804 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ChkaO54804 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ChkaO54804 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ChkaO54804 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ChkaO54804 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.75■□□□□ 0.43
ChkaO54804 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ChkaO54804 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ChkaO54804 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ChkaO54804 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.75■□□□□ 0.43
ChkaO54804 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ChkaO54804 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ChkaO54804 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.75■□□□□ 0.43
ChkaO54804 Mir8112-201ENSMUST00000184382 131 ntBASIC17.75■□□□□ 0.43
ChkaO54804 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ChkaO54804 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.75■□□□□ 0.43
ChkaO54804 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ChkaO54804 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ChkaO54804 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ChkaO54804 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ChkaO54804 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
ChkaO54804 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChkaO54804 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ChkaO54804 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ChkaO54804 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChkaO54804 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.74■□□□□ 0.43
ChkaO54804 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChkaO54804 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ChkaO54804 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ChkaO54804 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.74■□□□□ 0.43
ChkaO54804 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.74■□□□□ 0.43
ChkaO54804 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChkaO54804 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChkaO54804 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChkaO54804 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChkaO54804 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChkaO54804 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChkaO54804 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ChkaO54804 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChkaO54804 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ChkaO54804 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.74■□□□□ 0.43
ChkaO54804 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.74■□□□□ 0.43
ChkaO54804 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChkaO54804 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChkaO54804 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChkaO54804 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ChkaO54804 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ChkaO54804 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChkaO54804 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChkaO54804 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChkaO54804 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChkaO54804 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChkaO54804 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.73■□□□□ 0.43
ChkaO54804 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChkaO54804 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ChkaO54804 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ChkaO54804 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ChkaO54804 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChkaO54804 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ChkaO54804 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChkaO54804 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ChkaO54804 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ChkaO54804 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.73■□□□□ 0.43
ChkaO54804 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChkaO54804 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChkaO54804 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ChkaO54804 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
ChkaO54804 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
ChkaO54804 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ChkaO54804 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
ChkaO54804 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ChkaO54804 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ChkaO54804 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ChkaO54804 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms