Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sptlc1O35704 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sptlc1O35704 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sptlc1O35704 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sptlc1O35704 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sptlc1O35704 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sptlc1O35704 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sptlc1O35704 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sptlc1O35704 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sptlc1O35704 AA414768-201ENSMUST00000121924 1257 ntBASIC19.23■□□□□ 0.67
Sptlc1O35704 Gm22697-201ENSMUST00000175194 63 ntBASIC19.23■□□□□ 0.67
Sptlc1O35704 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.23■□□□□ 0.67
Sptlc1O35704 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sptlc1O35704 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Sptlc1O35704 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sptlc1O35704 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sptlc1O35704 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sptlc1O35704 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sptlc1O35704 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.22■□□□□ 0.67
Sptlc1O35704 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sptlc1O35704 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sptlc1O35704 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sptlc1O35704 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Sptlc1O35704 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sptlc1O35704 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sptlc1O35704 Gm16061-201ENSMUST00000122167 857 ntBASIC19.21■□□□□ 0.67
Sptlc1O35704 Gm43371-201ENSMUST00000202838 1031 ntBASIC19.21■□□□□ 0.67
Sptlc1O35704 Gm18101-201ENSMUST00000215769 548 ntBASIC19.21■□□□□ 0.67
Sptlc1O35704 Fst-202ENSMUST00000223640 2612 ntBASIC19.21■□□□□ 0.67
Sptlc1O35704 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sptlc1O35704 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sptlc1O35704 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sptlc1O35704 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sptlc1O35704 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sptlc1O35704 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Sptlc1O35704 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sptlc1O35704 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.21■□□□□ 0.67
Sptlc1O35704 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Sptlc1O35704 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sptlc1O35704 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sptlc1O35704 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Sptlc1O35704 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Sptlc1O35704 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Sptlc1O35704 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sptlc1O35704 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sptlc1O35704 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sptlc1O35704 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.2■□□□□ 0.66
Sptlc1O35704 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sptlc1O35704 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sptlc1O35704 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sptlc1O35704 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sptlc1O35704 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sptlc1O35704 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sptlc1O35704 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Sptlc1O35704 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sptlc1O35704 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.19■□□□□ 0.66
Sptlc1O35704 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sptlc1O35704 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sptlc1O35704 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sptlc1O35704 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sptlc1O35704 Gm7370-201ENSMUST00000219471 767 ntBASIC19.19■□□□□ 0.66
Sptlc1O35704 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sptlc1O35704 Gm25007-201ENSMUST00000083808 133 ntBASIC19.19■□□□□ 0.66
Sptlc1O35704 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sptlc1O35704 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sptlc1O35704 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Sptlc1O35704 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.19■□□□□ 0.66
Sptlc1O35704 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sptlc1O35704 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Sptlc1O35704 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sptlc1O35704 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sptlc1O35704 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.19■□□□□ 0.66
Sptlc1O35704 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sptlc1O35704 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Sptlc1O35704 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sptlc1O35704 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sptlc1O35704 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sptlc1O35704 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sptlc1O35704 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sptlc1O35704 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sptlc1O35704 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sptlc1O35704 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Sptlc1O35704 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.18■□□□□ 0.66
Sptlc1O35704 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sptlc1O35704 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.18■□□□□ 0.66
Sptlc1O35704 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sptlc1O35704 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sptlc1O35704 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sptlc1O35704 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sptlc1O35704 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sptlc1O35704 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.17■□□□□ 0.66
Sptlc1O35704 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sptlc1O35704 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sptlc1O35704 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.17■□□□□ 0.66
Sptlc1O35704 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Sptlc1O35704 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sptlc1O35704 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sptlc1O35704 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Sptlc1O35704 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sptlc1O35704 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms