Protein–RNA interactions for Protein: O35655

Ppef1, Serine/threonine-protein phosphatase with EF-hands 1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppef1O35655 Mir6956-201ENSMUST00000183598 62 ntBASIC20.76■□□□□ 0.91
Ppef1O35655 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ppef1O35655 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.76■□□□□ 0.91
Ppef1O35655 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ppef1O35655 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ppef1O35655 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ppef1O35655 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ppef1O35655 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ppef1O35655 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ppef1O35655 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Ppef1O35655 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ppef1O35655 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.75■□□□□ 0.91
Ppef1O35655 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ppef1O35655 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ppef1O35655 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC20.75■□□□□ 0.91
Ppef1O35655 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.75■□□□□ 0.91
Ppef1O35655 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ppef1O35655 AC140375.2-201ENSMUST00000225283 584 ntBASIC20.75■□□□□ 0.91
Ppef1O35655 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ppef1O35655 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ppef1O35655 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ppef1O35655 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ppef1O35655 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ppef1O35655 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ppef1O35655 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.74■□□□□ 0.91
Ppef1O35655 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ppef1O35655 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.74■□□□□ 0.91
Ppef1O35655 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ppef1O35655 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ppef1O35655 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ppef1O35655 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.73■□□□□ 0.91
Ppef1O35655 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ppef1O35655 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ppef1O35655 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC20.73■□□□□ 0.91
Ppef1O35655 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ppef1O35655 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ppef1O35655 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ppef1O35655 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Ppef1O35655 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.73■□□□□ 0.91
Ppef1O35655 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ppef1O35655 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ppef1O35655 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ppef1O35655 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.72■□□□□ 0.91
Ppef1O35655 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Ppef1O35655 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ppef1O35655 Hist1h2al-201ENSMUST00000091708 339 ntBASIC20.72■□□□□ 0.91
Ppef1O35655 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ppef1O35655 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ppef1O35655 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ppef1O35655 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ppef1O35655 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ppef1O35655 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ppef1O35655 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.71■□□□□ 0.91
Ppef1O35655 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ppef1O35655 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20.71■□□□□ 0.91
Ppef1O35655 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ppef1O35655 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ppef1O35655 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ppef1O35655 Gm15590-201ENSMUST00000078419 552 ntBASIC20.71■□□□□ 0.91
Ppef1O35655 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.71■□□□□ 0.91
Ppef1O35655 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ppef1O35655 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ppef1O35655 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ppef1O35655 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ppef1O35655 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ppef1O35655 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ppef1O35655 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ppef1O35655 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ppef1O35655 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ppef1O35655 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ppef1O35655 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ppef1O35655 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ppef1O35655 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ppef1O35655 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ppef1O35655 Rprl3-201ENSMUST00000157400 290 ntBASIC20.7■□□□□ 0.9
Ppef1O35655 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ppef1O35655 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC20.7■□□□□ 0.9
Ppef1O35655 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC20.7■□□□□ 0.9
Ppef1O35655 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC20.7■□□□□ 0.9
Ppef1O35655 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ppef1O35655 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ppef1O35655 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.7■□□□□ 0.9
Ppef1O35655 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ppef1O35655 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Ppef1O35655 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ppef1O35655 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ppef1O35655 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ppef1O35655 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ppef1O35655 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Ppef1O35655 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ppef1O35655 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.69■□□□□ 0.9
Ppef1O35655 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ppef1O35655 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ppef1O35655 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ppef1O35655 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.69■□□□□ 0.9
Ppef1O35655 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ppef1O35655 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ppef1O35655 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ppef1O35655 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ppef1O35655 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms