Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc1a6O35544 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Slc1a6O35544 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.37■□□□□ 0.37
Slc1a6O35544 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc1a6O35544 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Slc1a6O35544 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc1a6O35544 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc1a6O35544 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Slc1a6O35544 Nespas-201ENSMUST00000143738 1083 ntBASIC17.37■□□□□ 0.37
Slc1a6O35544 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc1a6O35544 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.37■□□□□ 0.37
Slc1a6O35544 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc1a6O35544 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc1a6O35544 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc1a6O35544 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc1a6O35544 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc1a6O35544 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.37■□□□□ 0.37
Slc1a6O35544 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc1a6O35544 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc1a6O35544 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc1a6O35544 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc1a6O35544 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Slc1a6O35544 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc1a6O35544 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.36■□□□□ 0.37
Slc1a6O35544 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc1a6O35544 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc1a6O35544 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc1a6O35544 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc1a6O35544 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc1a6O35544 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc1a6O35544 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc1a6O35544 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc1a6O35544 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.35■□□□□ 0.37
Slc1a6O35544 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc1a6O35544 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc1a6O35544 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc1a6O35544 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slc1a6O35544 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc1a6O35544 Haglr-201ENSMUST00000100000 2085 ntBASIC17.35■□□□□ 0.37
Slc1a6O35544 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc1a6O35544 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc1a6O35544 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc1a6O35544 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Slc1a6O35544 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc1a6O35544 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc1a6O35544 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc1a6O35544 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc1a6O35544 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc1a6O35544 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Slc1a6O35544 Mir8112-201ENSMUST00000184382 131 ntBASIC17.34■□□□□ 0.37
Slc1a6O35544 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc1a6O35544 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc1a6O35544 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc1a6O35544 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Slc1a6O35544 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.34■□□□□ 0.37
Slc1a6O35544 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc1a6O35544 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.33■□□□□ 0.37
Slc1a6O35544 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.33■□□□□ 0.37
Slc1a6O35544 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc1a6O35544 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc1a6O35544 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Slc1a6O35544 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc1a6O35544 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc1a6O35544 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc1a6O35544 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc1a6O35544 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.33■□□□□ 0.36
Slc1a6O35544 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.33■□□□□ 0.36
Slc1a6O35544 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Slc1a6O35544 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slc1a6O35544 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.33■□□□□ 0.36
Slc1a6O35544 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Slc1a6O35544 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slc1a6O35544 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.33■□□□□ 0.36
Slc1a6O35544 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc1a6O35544 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.33■□□□□ 0.36
Slc1a6O35544 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slc1a6O35544 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Slc1a6O35544 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.33■□□□□ 0.36
Slc1a6O35544 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc1a6O35544 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc1a6O35544 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc1a6O35544 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc1a6O35544 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc1a6O35544 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Slc1a6O35544 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Slc1a6O35544 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
Slc1a6O35544 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc1a6O35544 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc1a6O35544 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Slc1a6O35544 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc1a6O35544 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc1a6O35544 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.32■□□□□ 0.36
Slc1a6O35544 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc1a6O35544 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc1a6O35544 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc1a6O35544 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc1a6O35544 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc1a6O35544 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc1a6O35544 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc1a6O35544 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms