Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clk2O35491 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clk2O35491 Mir8112-201ENSMUST00000184382 131 ntBASIC19.16■□□□□ 0.66
Clk2O35491 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.16■□□□□ 0.66
Clk2O35491 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.16■□□□□ 0.66
Clk2O35491 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Clk2O35491 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clk2O35491 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clk2O35491 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clk2O35491 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clk2O35491 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk2O35491 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clk2O35491 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Clk2O35491 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Clk2O35491 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Clk2O35491 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Clk2O35491 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.15■□□□□ 0.66
Clk2O35491 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk2O35491 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk2O35491 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk2O35491 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk2O35491 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk2O35491 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.15■□□□□ 0.66
Clk2O35491 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk2O35491 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk2O35491 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk2O35491 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk2O35491 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk2O35491 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk2O35491 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Clk2O35491 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Clk2O35491 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clk2O35491 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clk2O35491 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clk2O35491 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Clk2O35491 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Clk2O35491 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.14■□□□□ 0.65
Clk2O35491 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clk2O35491 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.14■□□□□ 0.65
Clk2O35491 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.14■□□□□ 0.65
Clk2O35491 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clk2O35491 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clk2O35491 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clk2O35491 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clk2O35491 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clk2O35491 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clk2O35491 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Clk2O35491 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Clk2O35491 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk2O35491 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clk2O35491 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk2O35491 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk2O35491 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Clk2O35491 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk2O35491 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk2O35491 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Clk2O35491 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk2O35491 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clk2O35491 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.13■□□□□ 0.65
Clk2O35491 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.13■□□□□ 0.65
Clk2O35491 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk2O35491 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clk2O35491 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clk2O35491 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clk2O35491 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Clk2O35491 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.12■□□□□ 0.65
Clk2O35491 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clk2O35491 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clk2O35491 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clk2O35491 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.12■□□□□ 0.65
Clk2O35491 Gm7791-201ENSMUST00000219066 539 ntBASIC19.12■□□□□ 0.65
Clk2O35491 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clk2O35491 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Clk2O35491 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
Clk2O35491 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clk2O35491 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clk2O35491 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clk2O35491 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clk2O35491 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.11■□□□□ 0.65
Clk2O35491 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clk2O35491 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clk2O35491 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.11■□□□□ 0.65
Clk2O35491 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.11■□□□□ 0.65
Clk2O35491 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clk2O35491 Gm18959-201ENSMUST00000208954 655 ntBASIC19.11■□□□□ 0.65
Clk2O35491 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Clk2O35491 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clk2O35491 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Clk2O35491 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clk2O35491 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clk2O35491 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clk2O35491 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Clk2O35491 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clk2O35491 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clk2O35491 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clk2O35491 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clk2O35491 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.1■□□□□ 0.65
Clk2O35491 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.1■□□□□ 0.65
Clk2O35491 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.1■□□□□ 0.65
Clk2O35491 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms