Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn6O35454 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn6O35454 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn6O35454 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn6O35454 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn6O35454 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn6O35454 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn6O35454 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Clcn6O35454 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn6O35454 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn6O35454 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.66■□□□□ 0.58
Clcn6O35454 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn6O35454 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn6O35454 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn6O35454 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.65■□□□□ 0.58
Clcn6O35454 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.65■□□□□ 0.58
Clcn6O35454 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Clcn6O35454 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn6O35454 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn6O35454 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.65■□□□□ 0.58
Clcn6O35454 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.65■□□□□ 0.58
Clcn6O35454 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.65■□□□□ 0.58
Clcn6O35454 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn6O35454 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn6O35454 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.65■□□□□ 0.58
Clcn6O35454 AV356131-201ENSMUST00000206201 750 ntBASIC18.65■□□□□ 0.58
Clcn6O35454 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn6O35454 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn6O35454 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Clcn6O35454 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn6O35454 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn6O35454 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn6O35454 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn6O35454 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Clcn6O35454 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn6O35454 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clcn6O35454 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clcn6O35454 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clcn6O35454 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clcn6O35454 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn6O35454 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn6O35454 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Clcn6O35454 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn6O35454 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn6O35454 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn6O35454 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn6O35454 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn6O35454 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn6O35454 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.64■□□□□ 0.57
Clcn6O35454 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn6O35454 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn6O35454 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn6O35454 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.64■□□□□ 0.57
Clcn6O35454 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.64■□□□□ 0.57
Clcn6O35454 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn6O35454 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn6O35454 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.63■□□□□ 0.57
Clcn6O35454 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn6O35454 Gm13534-201ENSMUST00000121169 513 ntBASIC18.63■□□□□ 0.57
Clcn6O35454 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn6O35454 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn6O35454 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn6O35454 Gm29257-201ENSMUST00000186115 639 ntBASIC18.63■□□□□ 0.57
Clcn6O35454 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC18.63■□□□□ 0.57
Clcn6O35454 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn6O35454 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn6O35454 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Clcn6O35454 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn6O35454 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn6O35454 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn6O35454 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.62■□□□□ 0.57
Clcn6O35454 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn6O35454 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn6O35454 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Clcn6O35454 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn6O35454 Gm24380-201ENSMUST00000122696 324 ntBASIC18.62■□□□□ 0.57
Clcn6O35454 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Clcn6O35454 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Clcn6O35454 Gm44146-201ENSMUST00000203508 816 ntBASIC18.62■□□□□ 0.57
Clcn6O35454 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn6O35454 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn6O35454 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Clcn6O35454 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Clcn6O35454 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn6O35454 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn6O35454 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn6O35454 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn6O35454 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn6O35454 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn6O35454 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.62■□□□□ 0.57
Clcn6O35454 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn6O35454 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.62■□□□□ 0.57
Clcn6O35454 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn6O35454 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn6O35454 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.61■□□□□ 0.57
Clcn6O35454 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn6O35454 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn6O35454 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn6O35454 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn6O35454 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms