Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Raet1aO08602 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raet1aO08602 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Raet1aO08602 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Raet1aO08602 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Raet1aO08602 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Raet1aO08602 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.59■□□□□ 0.09
Raet1aO08602 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Raet1aO08602 Gm15375-201ENSMUST00000119510 849 ntBASIC15.59■□□□□ 0.09
Raet1aO08602 Gm13158-201ENSMUST00000122007 736 ntBASIC15.59■□□□□ 0.09
Raet1aO08602 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Raet1aO08602 Gm29257-201ENSMUST00000186115 639 ntBASIC15.59■□□□□ 0.09
Raet1aO08602 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Raet1aO08602 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Raet1aO08602 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.59■□□□□ 0.09
Raet1aO08602 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
Raet1aO08602 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Raet1aO08602 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Raet1aO08602 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Raet1aO08602 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Raet1aO08602 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Raet1aO08602 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Raet1aO08602 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Raet1aO08602 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Raet1aO08602 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Raet1aO08602 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.58■□□□□ 0.09
Raet1aO08602 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raet1aO08602 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Raet1aO08602 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raet1aO08602 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Raet1aO08602 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raet1aO08602 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
Raet1aO08602 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raet1aO08602 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raet1aO08602 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raet1aO08602 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Raet1aO08602 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raet1aO08602 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.58■□□□□ 0.08
Raet1aO08602 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raet1aO08602 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raet1aO08602 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Raet1aO08602 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Raet1aO08602 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.57■□□□□ 0.08
Raet1aO08602 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Raet1aO08602 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.57■□□□□ 0.08
Raet1aO08602 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.57■□□□□ 0.08
Raet1aO08602 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Raet1aO08602 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Raet1aO08602 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raet1aO08602 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1aO08602 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.56■□□□□ 0.08
Raet1aO08602 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1aO08602 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Raet1aO08602 Gm13401-201ENSMUST00000117074 291 ntBASIC15.56■□□□□ 0.08
Raet1aO08602 Gm12527-201ENSMUST00000117967 564 ntBASIC15.56■□□□□ 0.08
Raet1aO08602 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.56■□□□□ 0.08
Raet1aO08602 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Raet1aO08602 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1aO08602 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1aO08602 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Raet1aO08602 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1aO08602 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1aO08602 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.56■□□□□ 0.08
Raet1aO08602 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1aO08602 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.56■□□□□ 0.08
Raet1aO08602 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1aO08602 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Raet1aO08602 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Raet1aO08602 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1aO08602 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1aO08602 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1aO08602 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1aO08602 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.55■□□□□ 0.08
Raet1aO08602 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1aO08602 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms