Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Usp35M0QWN7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp35M0QWN7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp35M0QWN7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp35M0QWN7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Usp35M0QWN7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.83■□□□□ 0.61
Usp35M0QWN7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp35M0QWN7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp35M0QWN7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp35M0QWN7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Usp35M0QWN7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp35M0QWN7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp35M0QWN7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp35M0QWN7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp35M0QWN7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp35M0QWN7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp35M0QWN7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Usp35M0QWN7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Usp35M0QWN7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Usp35M0QWN7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.83■□□□□ 0.6
Usp35M0QWN7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp35M0QWN7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp35M0QWN7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Usp35M0QWN7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp35M0QWN7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Gm43183-201ENSMUST00000200632 547 ntBASIC18.82■□□□□ 0.6
Usp35M0QWN7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp35M0QWN7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp35M0QWN7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp35M0QWN7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp35M0QWN7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp35M0QWN7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Gm18025-201ENSMUST00000221733 862 ntBASIC18.81■□□□□ 0.6
Usp35M0QWN7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp35M0QWN7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp35M0QWN7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp35M0QWN7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp35M0QWN7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp35M0QWN7 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.8■□□□□ 0.6
Usp35M0QWN7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.8■□□□□ 0.6
Usp35M0QWN7 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.8■□□□□ 0.6
Usp35M0QWN7 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.8■□□□□ 0.6
Usp35M0QWN7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp35M0QWN7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp35M0QWN7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp35M0QWN7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp35M0QWN7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp35M0QWN7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp35M0QWN7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp35M0QWN7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp35M0QWN7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp35M0QWN7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp35M0QWN7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Usp35M0QWN7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp35M0QWN7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp35M0QWN7 Gm11643-201ENSMUST00000119578 864 ntBASIC18.79■□□□□ 0.6
Usp35M0QWN7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Usp35M0QWN7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.79■□□□□ 0.6
Usp35M0QWN7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp35M0QWN7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp35M0QWN7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp35M0QWN7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.79■□□□□ 0.6
Usp35M0QWN7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp35M0QWN7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp35M0QWN7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp35M0QWN7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp35M0QWN7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms