Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdh1F7BJK1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh1F7BJK1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdh1F7BJK1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh1F7BJK1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Pcdh1F7BJK1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh1F7BJK1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh1F7BJK1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdh1F7BJK1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh1F7BJK1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh1F7BJK1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdh1F7BJK1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdh1F7BJK1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Pcdh1F7BJK1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
Pcdh1F7BJK1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh1F7BJK1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh1F7BJK1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh1F7BJK1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh1F7BJK1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh1F7BJK1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdh1F7BJK1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdh1F7BJK1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdh1F7BJK1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Pcdh1F7BJK1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdh1F7BJK1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh1F7BJK1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh1F7BJK1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh1F7BJK1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdh1F7BJK1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh1F7BJK1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh1F7BJK1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh1F7BJK1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh1F7BJK1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh1F7BJK1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh1F7BJK1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh1F7BJK1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh1F7BJK1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh1F7BJK1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh1F7BJK1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh1F7BJK1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh1F7BJK1 Gm5874-201ENSMUST00000096101 508 ntBASIC15.82■□□□□ 0.12
Pcdh1F7BJK1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh1F7BJK1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdh1F7BJK1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh1F7BJK1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh1F7BJK1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh1F7BJK1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdh1F7BJK1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh1F7BJK1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdh1F7BJK1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh1F7BJK1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms