Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atf6F6VAN0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
Atf6F6VAN0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.07■□□□□ 0.48
Atf6F6VAN0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atf6F6VAN0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Atf6F6VAN0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
Atf6F6VAN0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6F6VAN0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6F6VAN0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Atf6F6VAN0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6F6VAN0 Gm29257-201ENSMUST00000186115 639 ntBASIC18.06■□□□□ 0.48
Atf6F6VAN0 Gm20049-201ENSMUST00000219950 730 ntBASIC18.06■□□□□ 0.48
Atf6F6VAN0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6F6VAN0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6F6VAN0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6F6VAN0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6F6VAN0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6F6VAN0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6F6VAN0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf6F6VAN0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf6F6VAN0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf6F6VAN0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Atf6F6VAN0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.05■□□□□ 0.48
Atf6F6VAN0 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.05■□□□□ 0.48
Atf6F6VAN0 Gm8969-201ENSMUST00000199694 526 ntBASIC18.05■□□□□ 0.48
Atf6F6VAN0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.05■□□□□ 0.48
Atf6F6VAN0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf6F6VAN0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf6F6VAN0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf6F6VAN0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf6F6VAN0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf6F6VAN0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf6F6VAN0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf6F6VAN0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.05■□□□□ 0.48
Atf6F6VAN0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Atf6F6VAN0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Gm10418-201ENSMUST00000100943 576 ntBASIC18.04■□□□□ 0.48
Atf6F6VAN0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Gm10138-203ENSMUST00000206952 366 ntBASIC18.04■□□□□ 0.48
Atf6F6VAN0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf6F6VAN0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf6F6VAN0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf6F6VAN0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf6F6VAN0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Atf6F6VAN0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf6F6VAN0 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.03■□□□□ 0.48
Atf6F6VAN0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.03■□□□□ 0.48
Atf6F6VAN0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf6F6VAN0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf6F6VAN0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.03■□□□□ 0.48
Atf6F6VAN0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atf6F6VAN0 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.03■□□□□ 0.48
Atf6F6VAN0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf6F6VAN0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf6F6VAN0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf6F6VAN0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Atf6F6VAN0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf6F6VAN0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atf6F6VAN0 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.02■□□□□ 0.48
Atf6F6VAN0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atf6F6VAN0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atf6F6VAN0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atf6F6VAN0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.02■□□□□ 0.48
Atf6F6VAN0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atf6F6VAN0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atf6F6VAN0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atf6F6VAN0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atf6F6VAN0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atf6F6VAN0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Atf6F6VAN0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Atf6F6VAN0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.01■□□□□ 0.47
Atf6F6VAN0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf6F6VAN0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf6F6VAN0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf6F6VAN0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atf6F6VAN0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf6F6VAN0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf6F6VAN0 Gm15375-201ENSMUST00000119510 849 ntBASIC18.01■□□□□ 0.47
Atf6F6VAN0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atf6F6VAN0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms