Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Gm21559-201ENSMUST00000220638 855 ntBASIC21.2■□□□□ 0.98
Ube4aE9Q735 Gm8587-201ENSMUST00000076538 843 ntBASIC21.2■□□□□ 0.98
Ube4aE9Q735 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.2■□□□□ 0.98
Ube4aE9Q735 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4aE9Q735 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4aE9Q735 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4aE9Q735 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4aE9Q735 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4aE9Q735 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4aE9Q735 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4aE9Q735 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4aE9Q735 Gm25016-201ENSMUST00000158399 131 ntBASIC21.19■□□□□ 0.98
Ube4aE9Q735 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ube4aE9Q735 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4aE9Q735 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC21.19■□□□□ 0.98
Ube4aE9Q735 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ube4aE9Q735 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4aE9Q735 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ube4aE9Q735 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4aE9Q735 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4aE9Q735 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube4aE9Q735 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ube4aE9Q735 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube4aE9Q735 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ube4aE9Q735 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC21.18■□□□□ 0.98
Ube4aE9Q735 Mir8112-201ENSMUST00000184382 131 ntBASIC21.18■□□□□ 0.98
Ube4aE9Q735 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube4aE9Q735 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ube4aE9Q735 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube4aE9Q735 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube4aE9Q735 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube4aE9Q735 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.18■□□□□ 0.98
Ube4aE9Q735 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.18■□□□□ 0.98
Ube4aE9Q735 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube4aE9Q735 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube4aE9Q735 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube4aE9Q735 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube4aE9Q735 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ube4aE9Q735 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube4aE9Q735 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube4aE9Q735 Gm27389-201ENSMUST00000183622 195 ntBASIC21.17■□□□□ 0.98
Ube4aE9Q735 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.17■□□□□ 0.98
Ube4aE9Q735 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube4aE9Q735 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.17■□□□□ 0.98
Ube4aE9Q735 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube4aE9Q735 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube4aE9Q735 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.17■□□□□ 0.98
Ube4aE9Q735 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Ube4aE9Q735 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube4aE9Q735 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube4aE9Q735 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube4aE9Q735 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube4aE9Q735 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube4aE9Q735 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ube4aE9Q735 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ube4aE9Q735 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ube4aE9Q735 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.16■□□□□ 0.98
Ube4aE9Q735 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ube4aE9Q735 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ube4aE9Q735 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ube4aE9Q735 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
Ube4aE9Q735 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Ube4aE9Q735 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Ube4aE9Q735 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ube4aE9Q735 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube4aE9Q735 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube4aE9Q735 Gm43272-201ENSMUST00000200599 1584 ntBASIC21.15■□□□□ 0.98
Ube4aE9Q735 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ube4aE9Q735 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube4aE9Q735 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube4aE9Q735 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube4aE9Q735 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ube4aE9Q735 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ube4aE9Q735 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube4aE9Q735 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
Ube4aE9Q735 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube4aE9Q735 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ube4aE9Q735 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ube4aE9Q735 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.14■□□□□ 0.98
Ube4aE9Q735 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Ube4aE9Q735 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.14■□□□□ 0.97
Ube4aE9Q735 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ube4aE9Q735 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC21.14■□□□□ 0.97
Ube4aE9Q735 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC21.14■□□□□ 0.97
Ube4aE9Q735 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ube4aE9Q735 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.14■□□□□ 0.97
Ube4aE9Q735 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.14■□□□□ 0.97
Ube4aE9Q735 Gm7213-201ENSMUST00000215977 950 ntBASIC21.14■□□□□ 0.97
Ube4aE9Q735 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ube4aE9Q735 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ube4aE9Q735 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ube4aE9Q735 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ube4aE9Q735 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms