Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhb9E9Q5G2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb9E9Q5G2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb9E9Q5G2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb9E9Q5G2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb9E9Q5G2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb9E9Q5G2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb9E9Q5G2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb9E9Q5G2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Pcdhb9E9Q5G2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.72■□□□□ 0.91
Pcdhb9E9Q5G2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb9E9Q5G2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb9E9Q5G2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb9E9Q5G2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb9E9Q5G2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.71■□□□□ 0.91
Pcdhb9E9Q5G2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb9E9Q5G2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.71■□□□□ 0.91
Pcdhb9E9Q5G2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb9E9Q5G2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb9E9Q5G2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb9E9Q5G2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb9E9Q5G2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb9E9Q5G2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb9E9Q5G2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Pcdhb9E9Q5G2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Pcdhb9E9Q5G2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdhb9E9Q5G2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb9E9Q5G2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb9E9Q5G2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb9E9Q5G2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb9E9Q5G2 Gm30025-201ENSMUST00000218555 728 ntBASIC20.7■□□□□ 0.9
Pcdhb9E9Q5G2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb9E9Q5G2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb9E9Q5G2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb9E9Q5G2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pcdhb9E9Q5G2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdhb9E9Q5G2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb9E9Q5G2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb9E9Q5G2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb9E9Q5G2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.69■□□□□ 0.9
Pcdhb9E9Q5G2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb9E9Q5G2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb9E9Q5G2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb9E9Q5G2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb9E9Q5G2 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.67■□□□□ 0.9
Pcdhb9E9Q5G2 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.67■□□□□ 0.9
Pcdhb9E9Q5G2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.67■□□□□ 0.9
Pcdhb9E9Q5G2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdhb9E9Q5G2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Pcdhb9E9Q5G2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb9E9Q5G2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb9E9Q5G2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.67■□□□□ 0.9
Pcdhb9E9Q5G2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb9E9Q5G2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb9E9Q5G2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb9E9Q5G2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb9E9Q5G2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 Gm11539-201ENSMUST00000119837 557 ntBASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 Gm13436-201ENSMUST00000120418 567 ntBASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 Gm43799-201ENSMUST00000201845 579 ntBASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb9E9Q5G2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb9E9Q5G2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb9E9Q5G2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb9E9Q5G2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb9E9Q5G2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdhb9E9Q5G2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms