Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf4lE9Q2N0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf4lE9Q2N0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Gm8969-201ENSMUST00000199694 526 ntBASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cpsf4lE9Q2N0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.87□□□□□ -0.03
Cpsf4lE9Q2N0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4lE9Q2N0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4lE9Q2N0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4lE9Q2N0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4lE9Q2N0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4lE9Q2N0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.87□□□□□ -0.03
Cpsf4lE9Q2N0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4lE9Q2N0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cpsf4lE9Q2N0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4lE9Q2N0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.87□□□□□ -0.03
Cpsf4lE9Q2N0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4lE9Q2N0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4lE9Q2N0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4lE9Q2N0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.86□□□□□ -0.03
Cpsf4lE9Q2N0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cpsf4lE9Q2N0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4lE9Q2N0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4lE9Q2N0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.86□□□□□ -0.03
Cpsf4lE9Q2N0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4lE9Q2N0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cpsf4lE9Q2N0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4lE9Q2N0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4lE9Q2N0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4lE9Q2N0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4lE9Q2N0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4lE9Q2N0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4lE9Q2N0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms