Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.36■□□□□ 0.21
Pcdh17E9PXF0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh17E9PXF0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh17E9PXF0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh17E9PXF0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh17E9PXF0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh17E9PXF0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh17E9PXF0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.36■□□□□ 0.21
Pcdh17E9PXF0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh17E9PXF0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh17E9PXF0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdh17E9PXF0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh17E9PXF0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 Gm11539-201ENSMUST00000119837 557 ntBASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 Gm13436-201ENSMUST00000120418 567 ntBASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh17E9PXF0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh17E9PXF0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdh17E9PXF0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.33■□□□□ 0.21
Pcdh17E9PXF0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdh17E9PXF0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdh17E9PXF0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh17E9PXF0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh17E9PXF0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh17E9PXF0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh17E9PXF0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh17E9PXF0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh17E9PXF0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh17E9PXF0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh17E9PXF0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh17E9PXF0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh17E9PXF0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Pcdh17E9PXF0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh17E9PXF0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdh17E9PXF0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh17E9PXF0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.33■□□□□ 0.2
Pcdh17E9PXF0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh17E9PXF0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms