Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-2D3Z4R4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Gm13216-201ENSMUST00000117145 591 ntBASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-2D3Z4R4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-2D3Z4R4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx6-2D3Z4R4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx6-2D3Z4R4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Nkx6-2D3Z4R4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-2D3Z4R4 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-2D3Z4R4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-2D3Z4R4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-2D3Z4R4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.33□□□□□ -0.12
Nkx6-2D3Z4R4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.33□□□□□ -0.12
Nkx6-2D3Z4R4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.33□□□□□ -0.12
Nkx6-2D3Z4R4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-2D3Z4R4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-2D3Z4R4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-2D3Z4R4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.33□□□□□ -0.12
Nkx6-2D3Z4R4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-2D3Z4R4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-2D3Z4R4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-2D3Z4R4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.33□□□□□ -0.12
Nkx6-2D3Z4R4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Nkx6-2D3Z4R4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-2D3Z4R4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-2D3Z4R4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-2D3Z4R4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-2D3Z4R4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-2D3Z4R4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.32□□□□□ -0.12
Nkx6-2D3Z4R4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nkx6-2D3Z4R4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-2D3Z4R4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.32□□□□□ -0.12
Nkx6-2D3Z4R4 Gm43530-201ENSMUST00000195920 274 ntBASIC14.32□□□□□ -0.12
Nkx6-2D3Z4R4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-2D3Z4R4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Nkx6-2D3Z4R4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nkx6-2D3Z4R4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-2D3Z4R4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-2D3Z4R4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-2D3Z4R4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nkx6-2D3Z4R4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-2D3Z4R4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms