Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx8D3YU81 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx8D3YU81 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx8D3YU81 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx8D3YU81 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx8D3YU81 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.61■□□□□ 0.57
Rfx8D3YU81 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rfx8D3YU81 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.61■□□□□ 0.57
Rfx8D3YU81 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.61■□□□□ 0.57
Rfx8D3YU81 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.61■□□□□ 0.57
Rfx8D3YU81 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx8D3YU81 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx8D3YU81 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx8D3YU81 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx8D3YU81 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx8D3YU81 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx8D3YU81 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.6■□□□□ 0.57
Rfx8D3YU81 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Rfx8D3YU81 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx8D3YU81 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx8D3YU81 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx8D3YU81 Gm11643-201ENSMUST00000119578 864 ntBASIC18.6■□□□□ 0.57
Rfx8D3YU81 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.6■□□□□ 0.57
Rfx8D3YU81 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.6■□□□□ 0.57
Rfx8D3YU81 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rfx8D3YU81 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx8D3YU81 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx8D3YU81 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx8D3YU81 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx8D3YU81 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Gm18025-201ENSMUST00000221733 862 ntBASIC18.59■□□□□ 0.57
Rfx8D3YU81 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx8D3YU81 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Rfx8D3YU81 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx8D3YU81 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx8D3YU81 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx8D3YU81 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Rfx8D3YU81 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx8D3YU81 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx8D3YU81 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.58■□□□□ 0.56
Rfx8D3YU81 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx8D3YU81 Gm8969-201ENSMUST00000199694 526 ntBASIC18.58■□□□□ 0.56
Rfx8D3YU81 Gm29791-202ENSMUST00000207888 369 ntBASIC18.58■□□□□ 0.56
Rfx8D3YU81 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.58■□□□□ 0.56
Rfx8D3YU81 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx8D3YU81 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx8D3YU81 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx8D3YU81 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx8D3YU81 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx8D3YU81 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx8D3YU81 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx8D3YU81 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx8D3YU81 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx8D3YU81 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx8D3YU81 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx8D3YU81 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.57■□□□□ 0.56
Rfx8D3YU81 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rfx8D3YU81 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.57■□□□□ 0.56
Rfx8D3YU81 Gm22240-201ENSMUST00000175225 82 ntBASIC18.57■□□□□ 0.56
Rfx8D3YU81 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.57■□□□□ 0.56
Rfx8D3YU81 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx8D3YU81 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rfx8D3YU81 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.57■□□□□ 0.56
Rfx8D3YU81 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx8D3YU81 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rfx8D3YU81 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx8D3YU81 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx8D3YU81 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx8D3YU81 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx8D3YU81 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx8D3YU81 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx8D3YU81 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.56■□□□□ 0.56
Rfx8D3YU81 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx8D3YU81 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx8D3YU81 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rfx8D3YU81 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx8D3YU81 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx8D3YU81 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx8D3YU81 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx8D3YU81 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx8D3YU81 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx8D3YU81 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms