Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Usp42B2RQC2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Usp42B2RQC2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.57■□□□□ 0.88
Usp42B2RQC2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp42B2RQC2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp42B2RQC2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp42B2RQC2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.57■□□□□ 0.88
Usp42B2RQC2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp42B2RQC2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.57■□□□□ 0.88
Usp42B2RQC2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Usp42B2RQC2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.57■□□□□ 0.88
Usp42B2RQC2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Usp42B2RQC2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp42B2RQC2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp42B2RQC2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp42B2RQC2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp42B2RQC2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp42B2RQC2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp42B2RQC2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp42B2RQC2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Usp42B2RQC2 Gm715-201ENSMUST00000117865 831 ntBASIC20.56■□□□□ 0.88
Usp42B2RQC2 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.56■□□□□ 0.88
Usp42B2RQC2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.56■□□□□ 0.88
Usp42B2RQC2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp42B2RQC2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.56■□□□□ 0.88
Usp42B2RQC2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.56■□□□□ 0.88
Usp42B2RQC2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp42B2RQC2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp42B2RQC2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp42B2RQC2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp42B2RQC2 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.56■□□□□ 0.88
Usp42B2RQC2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.56■□□□□ 0.88
Usp42B2RQC2 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.55■□□□□ 0.88
Usp42B2RQC2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp42B2RQC2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp42B2RQC2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp42B2RQC2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp42B2RQC2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp42B2RQC2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp42B2RQC2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Usp42B2RQC2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Usp42B2RQC2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp42B2RQC2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp42B2RQC2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp42B2RQC2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp42B2RQC2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.54■□□□□ 0.88
Usp42B2RQC2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.54■□□□□ 0.88
Usp42B2RQC2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.54■□□□□ 0.88
Usp42B2RQC2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp42B2RQC2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.54■□□□□ 0.88
Usp42B2RQC2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp42B2RQC2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp42B2RQC2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.54■□□□□ 0.88
Usp42B2RQC2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp42B2RQC2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp42B2RQC2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Usp42B2RQC2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Usp42B2RQC2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp42B2RQC2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp42B2RQC2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.53■□□□□ 0.88
Usp42B2RQC2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp42B2RQC2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Usp42B2RQC2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp42B2RQC2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp42B2RQC2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Usp42B2RQC2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp42B2RQC2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp42B2RQC2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Usp42B2RQC2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp42B2RQC2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Usp42B2RQC2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp42B2RQC2 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.53■□□□□ 0.88
Usp42B2RQC2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp42B2RQC2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Usp42B2RQC2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp42B2RQC2 Gm24841-201ENSMUST00000158676 357 ntBASIC20.53■□□□□ 0.88
Usp42B2RQC2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.53■□□□□ 0.88
Usp42B2RQC2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.52■□□□□ 0.88
Usp42B2RQC2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp42B2RQC2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp42B2RQC2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp42B2RQC2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Usp42B2RQC2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp42B2RQC2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Usp42B2RQC2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp42B2RQC2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp42B2RQC2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Usp42B2RQC2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Usp42B2RQC2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp42B2RQC2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp42B2RQC2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp42B2RQC2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp42B2RQC2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Usp42B2RQC2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.52■□□□□ 0.87
Usp42B2RQC2 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.52■□□□□ 0.87
Usp42B2RQC2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Usp42B2RQC2 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.52■□□□□ 0.87
Usp42B2RQC2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp42B2RQC2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.52■□□□□ 0.87
Usp42B2RQC2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms