Protein–RNA interactions for Protein: B1AYM9

CK137956, cDNA sequence CK137956, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CK137956B1AYM9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CK137956B1AYM9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CK137956B1AYM9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CK137956B1AYM9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CK137956B1AYM9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CK137956B1AYM9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CK137956B1AYM9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CK137956B1AYM9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CK137956B1AYM9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CK137956B1AYM9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.68■□□□□ 0.26
CK137956B1AYM9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.68■□□□□ 0.26
CK137956B1AYM9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CK137956B1AYM9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CK137956B1AYM9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CK137956B1AYM9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CK137956B1AYM9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CK137956B1AYM9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CK137956B1AYM9 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.67■□□□□ 0.26
CK137956B1AYM9 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.67■□□□□ 0.26
CK137956B1AYM9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CK137956B1AYM9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CK137956B1AYM9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CK137956B1AYM9 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.67■□□□□ 0.26
CK137956B1AYM9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.67■□□□□ 0.26
CK137956B1AYM9 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.67■□□□□ 0.26
CK137956B1AYM9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CK137956B1AYM9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CK137956B1AYM9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CK137956B1AYM9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CK137956B1AYM9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CK137956B1AYM9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CK137956B1AYM9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CK137956B1AYM9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CK137956B1AYM9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CK137956B1AYM9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CK137956B1AYM9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CK137956B1AYM9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CK137956B1AYM9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CK137956B1AYM9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CK137956B1AYM9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.65■□□□□ 0.26
CK137956B1AYM9 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.65■□□□□ 0.26
CK137956B1AYM9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CK137956B1AYM9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CK137956B1AYM9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CK137956B1AYM9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CK137956B1AYM9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CK137956B1AYM9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CK137956B1AYM9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CK137956B1AYM9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CK137956B1AYM9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CK137956B1AYM9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.64■□□□□ 0.25
CK137956B1AYM9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CK137956B1AYM9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CK137956B1AYM9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CK137956B1AYM9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CK137956B1AYM9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CK137956B1AYM9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CK137956B1AYM9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CK137956B1AYM9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CK137956B1AYM9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CK137956B1AYM9 Rarb-207ENSMUST00000225921 2756 ntBASIC16.64■□□□□ 0.25
CK137956B1AYM9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CK137956B1AYM9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CK137956B1AYM9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CK137956B1AYM9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CK137956B1AYM9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CK137956B1AYM9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CK137956B1AYM9 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.63■□□□□ 0.25
CK137956B1AYM9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CK137956B1AYM9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CK137956B1AYM9 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.63■□□□□ 0.25
CK137956B1AYM9 Timm23-208ENSMUST00000226683 750 ntBASIC16.63■□□□□ 0.25
CK137956B1AYM9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CK137956B1AYM9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CK137956B1AYM9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CK137956B1AYM9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CK137956B1AYM9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CK137956B1AYM9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CK137956B1AYM9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CK137956B1AYM9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms