Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col6a5A6H584 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a5A6H584 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a5A6H584 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a5A6H584 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a5A6H584 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a5A6H584 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.31□□□□□ -0.28
Col6a5A6H584 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col6a5A6H584 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.31□□□□□ -0.28
Col6a5A6H584 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.31□□□□□ -0.28
Col6a5A6H584 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.31□□□□□ -0.28
Col6a5A6H584 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.31□□□□□ -0.28
Col6a5A6H584 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a5A6H584 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a5A6H584 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a5A6H584 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.31□□□□□ -0.28
Col6a5A6H584 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a5A6H584 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a5A6H584 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a5A6H584 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a5A6H584 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a5A6H584 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a5A6H584 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.3□□□□□ -0.28
Col6a5A6H584 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a5A6H584 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a5A6H584 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.3□□□□□ -0.28
Col6a5A6H584 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a5A6H584 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a5A6H584 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a5A6H584 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a5A6H584 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.3□□□□□ -0.28
Col6a5A6H584 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a5A6H584 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.3□□□□□ -0.28
Col6a5A6H584 Gm9731-201ENSMUST00000209480 747 ntBASIC13.3□□□□□ -0.28
Col6a5A6H584 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a5A6H584 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a5A6H584 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a5A6H584 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col6a5A6H584 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col6a5A6H584 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.29□□□□□ -0.28
Col6a5A6H584 Gm14494-201ENSMUST00000118786 435 ntBASIC13.29□□□□□ -0.28
Col6a5A6H584 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a5A6H584 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.29□□□□□ -0.28
Col6a5A6H584 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a5A6H584 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.28□□□□□ -0.28
Col6a5A6H584 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.28□□□□□ -0.28
Col6a5A6H584 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.28□□□□□ -0.28
Col6a5A6H584 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a5A6H584 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a5A6H584 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a5A6H584 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a5A6H584 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a5A6H584 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a5A6H584 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col6a5A6H584 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a5A6H584 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a5A6H584 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.28□□□□□ -0.28
Col6a5A6H584 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col6a5A6H584 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.28□□□□□ -0.28
Col6a5A6H584 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a5A6H584 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a5A6H584 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a5A6H584 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a5A6H584 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a5A6H584 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a5A6H584 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.27□□□□□ -0.28
Col6a5A6H584 Gm7862-201ENSMUST00000121461 292 ntBASIC13.27□□□□□ -0.28
Col6a5A6H584 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Col6a5A6H584 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a5A6H584 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a5A6H584 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a5A6H584 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.27□□□□□ -0.28
Col6a5A6H584 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a5A6H584 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a5A6H584 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a5A6H584 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Col6a5A6H584 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a5A6H584 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a5A6H584 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a5A6H584 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a5A6H584 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a5A6H584 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.27□□□□□ -0.29
Col6a5A6H584 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms