Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.7■□□□□ 0.74
Scn3aA2ASI5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn3aA2ASI5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn3aA2ASI5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn3aA2ASI5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.69■□□□□ 0.74
Scn3aA2ASI5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Scn3aA2ASI5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.69■□□□□ 0.74
Scn3aA2ASI5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Scn3aA2ASI5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn3aA2ASI5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn3aA2ASI5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn3aA2ASI5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn3aA2ASI5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn3aA2ASI5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn3aA2ASI5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn3aA2ASI5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn3aA2ASI5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn3aA2ASI5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn3aA2ASI5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn3aA2ASI5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scn3aA2ASI5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.68■□□□□ 0.74
Scn3aA2ASI5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Scn3aA2ASI5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.68■□□□□ 0.74
Scn3aA2ASI5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Scn3aA2ASI5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn3aA2ASI5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn3aA2ASI5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.68■□□□□ 0.74
Scn3aA2ASI5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Scn3aA2ASI5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn3aA2ASI5 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.68■□□□□ 0.74
Scn3aA2ASI5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.68■□□□□ 0.74
Scn3aA2ASI5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn3aA2ASI5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Grk6-206ENSMUST00000224995 2971 ntBASIC19.67■□□□□ 0.74
Scn3aA2ASI5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Gm33142-201ENSMUST00000193913 867 ntBASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.66■□□□□ 0.74
Scn3aA2ASI5 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Gm10566-201ENSMUST00000086739 996 ntBASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn3aA2ASI5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn3aA2ASI5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn3aA2ASI5 Gm9013-201ENSMUST00000132939 882 ntBASIC19.65■□□□□ 0.74
Scn3aA2ASI5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn3aA2ASI5 Gm5587-201ENSMUST00000206270 674 ntBASIC19.65■□□□□ 0.74
Scn3aA2ASI5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn3aA2ASI5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Scn3aA2ASI5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn3aA2ASI5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn3aA2ASI5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn3aA2ASI5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Scn3aA2ASI5 Gm21362-201ENSMUST00000194272 928 ntBASIC19.64■□□□□ 0.74
Scn3aA2ASI5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Scn3aA2ASI5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scn3aA2ASI5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
Scn3aA2ASI5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scn3aA2ASI5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scn3aA2ASI5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.64■□□□□ 0.73
Scn3aA2ASI5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn3aA2ASI5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.64■□□□□ 0.73
Scn3aA2ASI5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scn3aA2ASI5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Scn3aA2ASI5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Scn3aA2ASI5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn3aA2ASI5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scn3aA2ASI5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn3aA2ASI5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Scn3aA2ASI5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn3aA2ASI5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms