Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scn1aA2APX8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn1aA2APX8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn1aA2APX8 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.49■□□□□ 0.55
Scn1aA2APX8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scn1aA2APX8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Scn1aA2APX8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scn1aA2APX8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn1aA2APX8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Scn1aA2APX8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Scn1aA2APX8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn1aA2APX8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scn1aA2APX8 Gm7638-201ENSMUST00000121348 967 ntBASIC18.49■□□□□ 0.55
Scn1aA2APX8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.49■□□□□ 0.55
Scn1aA2APX8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn1aA2APX8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Scn1aA2APX8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.48■□□□□ 0.55
Scn1aA2APX8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn1aA2APX8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn1aA2APX8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn1aA2APX8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Scn1aA2APX8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.48■□□□□ 0.55
Scn1aA2APX8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn1aA2APX8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn1aA2APX8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Scn1aA2APX8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn1aA2APX8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn1aA2APX8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn1aA2APX8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.48■□□□□ 0.55
Scn1aA2APX8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Scn1aA2APX8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.47■□□□□ 0.55
Scn1aA2APX8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scn1aA2APX8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scn1aA2APX8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scn1aA2APX8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn1aA2APX8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scn1aA2APX8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
Scn1aA2APX8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn1aA2APX8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn1aA2APX8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scn1aA2APX8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Scn1aA2APX8 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.47■□□□□ 0.55
Scn1aA2APX8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scn1aA2APX8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn1aA2APX8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.46■□□□□ 0.55
Scn1aA2APX8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.46■□□□□ 0.55
Scn1aA2APX8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn1aA2APX8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn1aA2APX8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.46■□□□□ 0.55
Scn1aA2APX8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn1aA2APX8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn1aA2APX8 Gm10231-201ENSMUST00000181584 441 ntBASIC18.46■□□□□ 0.55
Scn1aA2APX8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn1aA2APX8 Gm10175-202ENSMUST00000208752 441 ntBASIC18.46■□□□□ 0.55
Scn1aA2APX8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn1aA2APX8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn1aA2APX8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Scn1aA2APX8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn1aA2APX8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn1aA2APX8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn1aA2APX8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn1aA2APX8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn1aA2APX8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn1aA2APX8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Scn1aA2APX8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn1aA2APX8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Scn1aA2APX8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn1aA2APX8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn1aA2APX8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn1aA2APX8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Scn1aA2APX8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn1aA2APX8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn1aA2APX8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn1aA2APX8 Gm9731-201ENSMUST00000209480 747 ntBASIC18.45■□□□□ 0.54
Scn1aA2APX8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn1aA2APX8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Scn1aA2APX8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.45■□□□□ 0.54
Scn1aA2APX8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn1aA2APX8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn1aA2APX8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Scn1aA2APX8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn1aA2APX8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn1aA2APX8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn1aA2APX8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.44■□□□□ 0.54
Scn1aA2APX8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn1aA2APX8 Gm27463-201ENSMUST00000183569 57 ntBASIC18.44■□□□□ 0.54
Scn1aA2APX8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Scn1aA2APX8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Scn1aA2APX8 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.44■□□□□ 0.54
Scn1aA2APX8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn1aA2APX8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn1aA2APX8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn1aA2APX8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn1aA2APX8 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.44■□□□□ 0.54
Scn1aA2APX8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn1aA2APX8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn1aA2APX8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Scn1aA2APX8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn1aA2APX8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.43■□□□□ 0.54
Scn1aA2APX8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms