Protein–RNA interactions for Protein: A0A140T8N5

Igkv6-23, Immunoglobulin kappa variable 6-23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-23A0A140T8N5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.51■□□□□ 0.07
Igkv6-23A0A140T8N5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv6-23A0A140T8N5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv6-23A0A140T8N5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv6-23A0A140T8N5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv6-23A0A140T8N5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.51■□□□□ 0.07
Igkv6-23A0A140T8N5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv6-23A0A140T8N5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Igkv6-23A0A140T8N5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv6-23A0A140T8N5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv6-23A0A140T8N5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv6-23A0A140T8N5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv6-23A0A140T8N5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv6-23A0A140T8N5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Igkv6-23A0A140T8N5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv6-23A0A140T8N5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.5■□□□□ 0.07
Igkv6-23A0A140T8N5 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.5■□□□□ 0.07
Igkv6-23A0A140T8N5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv6-23A0A140T8N5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.5■□□□□ 0.07
Igkv6-23A0A140T8N5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.5■□□□□ 0.07
Igkv6-23A0A140T8N5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv6-23A0A140T8N5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv6-23A0A140T8N5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv6-23A0A140T8N5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv6-23A0A140T8N5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv6-23A0A140T8N5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.49■□□□□ 0.07
Igkv6-23A0A140T8N5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv6-23A0A140T8N5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv6-23A0A140T8N5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv6-23A0A140T8N5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv6-23A0A140T8N5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.49■□□□□ 0.07
Igkv6-23A0A140T8N5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv6-23A0A140T8N5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv6-23A0A140T8N5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Igkv6-23A0A140T8N5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv6-23A0A140T8N5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv6-23A0A140T8N5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv6-23A0A140T8N5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.49■□□□□ 0.07
Igkv6-23A0A140T8N5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Gm18101-201ENSMUST00000215769 548 ntBASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Gm7370-201ENSMUST00000219471 767 ntBASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv6-23A0A140T8N5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Gm22697-201ENSMUST00000175194 63 ntBASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv6-23A0A140T8N5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Igkv6-23A0A140T8N5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Igkv6-23A0A140T8N5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Igkv6-23A0A140T8N5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Igkv6-23A0A140T8N5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Igkv6-23A0A140T8N5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Igkv6-23A0A140T8N5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.46■□□□□ 0.07
Igkv6-23A0A140T8N5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Igkv6-23A0A140T8N5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Igkv6-23A0A140T8N5 Gm23634-201ENSMUST00000175071 91 ntBASIC15.46■□□□□ 0.07
Igkv6-23A0A140T8N5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Igkv6-23A0A140T8N5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Igkv6-23A0A140T8N5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms