Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Atg4a-psA0A0G2JFS9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Gm43808-201ENSMUST00000202534 2065 ntBASIC21.4■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.39■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Atg4a-psA0A0G2JFS9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Gm10517-202ENSMUST00000192970 758 ntBASIC21.39■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Atg4a-psA0A0G2JFS9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.38■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.37■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Gm6598-201ENSMUST00000202719 2615 ntBASIC21.37■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.37■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Atg4a-psA0A0G2JFS9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.37■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Atg4a-psA0A0G2JFS9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Atg4a-psA0A0G2JFS9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.36■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.36■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.36■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Gm4974-201ENSMUST00000209974 875 ntBASIC21.36■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.36■■□□□ 1.01
Atg4a-psA0A0G2JFS9 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.36■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.35■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Gm22240-201ENSMUST00000175225 82 ntBASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Atg4a-psA0A0G2JFS9 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.33■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Atg4a-psA0A0G2JFS9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Atg4a-psA0A0G2JFS9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Atg4a-psA0A0G2JFS9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC21.32■■□□□ 1
Atg4a-psA0A0G2JFS9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21.32■■□□□ 1
Atg4a-psA0A0G2JFS9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC21.32■■□□□ 1
Atg4a-psA0A0G2JFS9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC21.32■■□□□ 1
Atg4a-psA0A0G2JFS9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atg4a-psA0A0G2JFS9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.32■■□□□ 1
Atg4a-psA0A0G2JFS9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.32■■□□□ 1
Atg4a-psA0A0G2JFS9 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms