Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.05■□□□□ 0.48
Igkv5-45A0A0B4J1J1 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.05■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igkv5-45A0A0B4J1J1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.04■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Gm7977-201ENSMUST00000193787 748 ntBASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Gm37025-201ENSMUST00000195159 829 ntBASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.02■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-45A0A0B4J1J1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.02■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Gm9731-201ENSMUST00000209480 747 ntBASIC18.02■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.02■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv5-45A0A0B4J1J1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Igkv5-45A0A0B4J1J1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.02■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.01■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Il3ra-202ENSMUST00000223589 738 ntBASIC18.01■□□□□ 0.47
Igkv5-45A0A0B4J1J1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.01■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18■□□□□ 0.47
Igkv5-45A0A0B4J1J1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Gm17661-201ENSMUST00000170317 270 ntBASIC18■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.99■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms