Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv20A0A0B4J1H5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Gm13216-201ENSMUST00000117145 591 ntBASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Gm9847-201ENSMUST00000052528 599 ntBASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv20A0A0B4J1H5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv20A0A0B4J1H5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv20A0A0B4J1H5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.78■□□□□ 0.12
Trbv20A0A0B4J1H5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.78■□□□□ 0.12
Trbv20A0A0B4J1H5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv20A0A0B4J1H5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv20A0A0B4J1H5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv20A0A0B4J1H5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv20A0A0B4J1H5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv20A0A0B4J1H5 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv20A0A0B4J1H5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv20A0A0B4J1H5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv20A0A0B4J1H5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv20A0A0B4J1H5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv20A0A0B4J1H5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv20A0A0B4J1H5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv20A0A0B4J1H5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv20A0A0B4J1H5 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trbv20A0A0B4J1H5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Trbv20A0A0B4J1H5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv20A0A0B4J1H5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Trbv20A0A0B4J1H5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.77■□□□□ 0.12
Trbv20A0A0B4J1H5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv20A0A0B4J1H5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv20A0A0B4J1H5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Trbv20A0A0B4J1H5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.77■□□□□ 0.11
Trbv20A0A0B4J1H5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trbv20A0A0B4J1H5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv20A0A0B4J1H5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv20A0A0B4J1H5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv20A0A0B4J1H5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trbv20A0A0B4J1H5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Trbv20A0A0B4J1H5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.77■□□□□ 0.11
Trbv20A0A0B4J1H5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Gm8493-201ENSMUST00000196881 489 ntBASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv20A0A0B4J1H5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms