Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh7A0A0A6YY83 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh7A0A0A6YY83 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh7A0A0A6YY83 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh7A0A0A6YY83 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh7A0A0A6YY83 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh7A0A0A6YY83 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh7A0A0A6YY83 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Pcdh7A0A0A6YY83 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh7A0A0A6YY83 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh7A0A0A6YY83 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh7A0A0A6YY83 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdh7A0A0A6YY83 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh7A0A0A6YY83 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh7A0A0A6YY83 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh7A0A0A6YY83 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.11■□□□□ 0.49
Pcdh7A0A0A6YY83 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh7A0A0A6YY83 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh7A0A0A6YY83 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh7A0A0A6YY83 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.11■□□□□ 0.49
Pcdh7A0A0A6YY83 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdh7A0A0A6YY83 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh7A0A0A6YY83 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh7A0A0A6YY83 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdh7A0A0A6YY83 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh7A0A0A6YY83 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh7A0A0A6YY83 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh7A0A0A6YY83 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh7A0A0A6YY83 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdh7A0A0A6YY83 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh7A0A0A6YY83 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh7A0A0A6YY83 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdh7A0A0A6YY83 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh7A0A0A6YY83 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh7A0A0A6YY83 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdh7A0A0A6YY83 Gm4974-201ENSMUST00000209974 875 ntBASIC18.1■□□□□ 0.49
Pcdh7A0A0A6YY83 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh7A0A0A6YY83 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh7A0A0A6YY83 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.1■□□□□ 0.49
Pcdh7A0A0A6YY83 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh7A0A0A6YY83 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh7A0A0A6YY83 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh7A0A0A6YY83 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh7A0A0A6YY83 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh7A0A0A6YY83 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh7A0A0A6YY83 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh7A0A0A6YY83 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdh7A0A0A6YY83 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.09■□□□□ 0.49
Pcdh7A0A0A6YY83 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh7A0A0A6YY83 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
Pcdh7A0A0A6YY83 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdh7A0A0A6YY83 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh7A0A0A6YY83 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh7A0A0A6YY83 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh7A0A0A6YY83 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh7A0A0A6YY83 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh7A0A0A6YY83 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh7A0A0A6YY83 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Pcdh7A0A0A6YY83 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh7A0A0A6YY83 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh7A0A0A6YY83 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh7A0A0A6YY83 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh7A0A0A6YY83 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh7A0A0A6YY83 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh7A0A0A6YY83 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh7A0A0A6YY83 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdh7A0A0A6YY83 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdh7A0A0A6YY83 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh7A0A0A6YY83 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh7A0A0A6YY83 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh7A0A0A6YY83 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh7A0A0A6YY83 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh7A0A0A6YY83 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdh7A0A0A6YY83 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh7A0A0A6YY83 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdh7A0A0A6YY83 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Pcdh7A0A0A6YY83 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh7A0A0A6YY83 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh7A0A0A6YY83 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh7A0A0A6YY83 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh7A0A0A6YY83 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Pcdh7A0A0A6YY83 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh7A0A0A6YY83 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms