Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv3-4A0A0A6YXF1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv3-4A0A0A6YXF1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv3-4A0A0A6YXF1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.59□□□□□ -0.07
Ighv3-4A0A0A6YXF1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv3-4A0A0A6YXF1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv3-4A0A0A6YXF1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.59□□□□□ -0.07
Ighv3-4A0A0A6YXF1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv3-4A0A0A6YXF1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv3-4A0A0A6YXF1 Gm5587-201ENSMUST00000206270 674 ntBASIC14.59□□□□□ -0.07
Ighv3-4A0A0A6YXF1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.59□□□□□ -0.07
Ighv3-4A0A0A6YXF1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv3-4A0A0A6YXF1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ighv3-4A0A0A6YXF1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv3-4A0A0A6YXF1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv3-4A0A0A6YXF1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Ighv3-4A0A0A6YXF1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.58□□□□□ -0.07
Ighv3-4A0A0A6YXF1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Gm37025-201ENSMUST00000195159 829 ntBASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Gm9731-201ENSMUST00000209480 747 ntBASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Gm27704-201ENSMUST00000185094 107 ntBASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Gm7213-201ENSMUST00000215977 950 ntBASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Il3ra-202ENSMUST00000223589 738 ntBASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.55□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.55□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.55□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ighv3-4A0A0A6YXF1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms