Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Gm38205-201ENSMUST00000192243 258 ntBASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Gm42569-201ENSMUST00000200539 472 ntBASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 AV356131-201ENSMUST00000206201 750 ntBASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6n-6A0A075B6B2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6n-6A0A075B6B2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6n-6A0A075B6B2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav6n-6A0A075B6B2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6n-6A0A075B6B2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6n-6A0A075B6B2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Trav6n-6A0A075B6B2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav6n-6A0A075B6B2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6n-6A0A075B6B2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6n-6A0A075B6B2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav6n-6A0A075B6B2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav6n-6A0A075B6B2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6n-6A0A075B6B2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6n-6A0A075B6B2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6n-6A0A075B6B2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Trav6n-6A0A075B6B2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav6n-6A0A075B6B2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6n-6A0A075B6B2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Gm10033-202ENSMUST00000211874 928 ntBASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6n-6A0A075B6B2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6n-6A0A075B6B2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Gm13146-201ENSMUST00000118508 780 ntBASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms