Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-7A0A075B6A6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-7A0A075B6A6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav6n-7A0A075B6A6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-7A0A075B6A6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-7A0A075B6A6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-7A0A075B6A6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-7A0A075B6A6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-7A0A075B6A6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav6n-7A0A075B6A6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-7A0A075B6A6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-7A0A075B6A6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav6n-7A0A075B6A6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-7A0A075B6A6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Trav6n-7A0A075B6A6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-7A0A075B6A6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6n-7A0A075B6A6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm11643-201ENSMUST00000119578 864 ntBASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm43183-201ENSMUST00000200632 547 ntBASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6n-7A0A075B6A6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-7A0A075B6A6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-7A0A075B6A6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav6n-7A0A075B6A6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav6n-7A0A075B6A6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav6n-7A0A075B6A6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-7A0A075B6A6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm37292-201ENSMUST00000192062 758 ntBASIC14.93□□□□□ -0.02
Trav6n-7A0A075B6A6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-7A0A075B6A6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-7A0A075B6A6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-7A0A075B6A6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6n-7A0A075B6A6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-7A0A075B6A6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Trav6n-7A0A075B6A6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Trav6n-7A0A075B6A6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-7A0A075B6A6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-7A0A075B6A6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-7A0A075B6A6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-7A0A075B6A6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm12382-201ENSMUST00000122005 922 ntBASIC14.92□□□□□ -0.02
Trav6n-7A0A075B6A6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.92□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-7A0A075B6A6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-7A0A075B6A6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-7A0A075B6A6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-7A0A075B6A6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-7A0A075B6A6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6n-7A0A075B6A6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm13401-201ENSMUST00000117074 291 ntBASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm6576-201ENSMUST00000169678 883 ntBASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm10812-201ENSMUST00000099864 546 ntBASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6n-7A0A075B6A6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-7A0A075B6A6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav6n-7A0A075B6A6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav6n-7A0A075B6A6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav6n-7A0A075B6A6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trav6n-7A0A075B6A6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-7A0A075B6A6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-7A0A075B6A6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-7A0A075B6A6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6n-7A0A075B6A6 Rarb-207ENSMUST00000225921 2756 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms