Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Gm10418-201ENSMUST00000100943 576 ntBASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Nespas-201ENSMUST00000143738 1083 ntBASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Gm2011-201ENSMUST00000203124 1263 ntBASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-4-dv10A0A075B651 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Gm42778-201ENSMUST00000199644 553 ntBASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-4-dv10A0A075B651 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Mir8112-201ENSMUST00000184382 131 ntBASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Gm29791-202ENSMUST00000207888 369 ntBASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-4-dv10A0A075B651 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-4-dv10A0A075B651 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-4-dv10A0A075B651 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.71□□□□□ -0.21
Trav4-4-dv10A0A075B651 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-4-dv10A0A075B651 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-4-dv10A0A075B651 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-4-dv10A0A075B651 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-4-dv10A0A075B651 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-4-dv10A0A075B651 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-4-dv10A0A075B651 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-4-dv10A0A075B651 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-4-dv10A0A075B651 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.71□□□□□ -0.21
Trav4-4-dv10A0A075B651 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-4-dv10A0A075B651 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.71□□□□□ -0.22
Trav4-4-dv10A0A075B651 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4-4-dv10A0A075B651 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4-4-dv10A0A075B651 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4-4-dv10A0A075B651 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.71□□□□□ -0.22
Trav4-4-dv10A0A075B651 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-4-dv10A0A075B651 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms