Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-4A0A075B631 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-4A0A075B631 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Gm8969-201ENSMUST00000199694 526 ntBASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9n-4A0A075B631 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav9n-4A0A075B631 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9n-4A0A075B631 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9n-4A0A075B631 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9n-4A0A075B631 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav9n-4A0A075B631 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9n-4A0A075B631 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9n-4A0A075B631 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav9n-4A0A075B631 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-4A0A075B631 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-4A0A075B631 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-4A0A075B631 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav9n-4A0A075B631 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav9n-4A0A075B631 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav9n-4A0A075B631 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-4A0A075B631 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-4A0A075B631 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-4A0A075B631 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-4A0A075B631 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav9n-4A0A075B631 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-4A0A075B631 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-4A0A075B631 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms