Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm3616-201ENSMUST00000174430 2514 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm3683-201ENSMUST00000175701 2513 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 AC120375.2-201ENSMUST00000226532 1853 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Mir449c-201ENSMUST00000102192 109 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Mir674-201ENSMUST00000102421 100 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm13141-201ENSMUST00000117417 456 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm13983-201ENSMUST00000118018 865 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm15149-201ENSMUST00000119370 360 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm15349-201ENSMUST00000121154 204 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm12340-201ENSMUST00000121617 462 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm22073-201ENSMUST00000122668 189 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm6434-201ENSMUST00000163316 372 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm22990-201ENSMUST00000175427 89 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Mir6908-201ENSMUST00000184056 63 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Mir6987-201ENSMUST00000184789 73 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm28666-201ENSMUST00000186649 274 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm18849-201ENSMUST00000189861 560 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm17781-201ENSMUST00000195232 649 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 AC132437.1-201ENSMUST00000218308 320 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 AC122327.2-201ENSMUST00000220883 120 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 AC122327.3-201ENSMUST00000221852 120 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 AC166341.1-201ENSMUST00000223360 105 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 AC154640.2-201ENSMUST00000226324 472 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 AC166369.1-201ENSMUST00000228126 351 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm23623-201ENSMUST00000082461 107 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm23096-201ENSMUST00000083447 107 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.97□□□□□ -1.45
Trim39Q9ESN2 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim39Q9ESN2 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Trim39Q9ESN2 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Trim39Q9ESN2 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim39Q9ESN2 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm23691-201ENSMUST00000101878 107 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm14125-201ENSMUST00000113442 680 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm14681-201ENSMUST00000118047 411 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm11268-201ENSMUST00000118347 267 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm14352-201ENSMUST00000119250 449 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm8430-201ENSMUST00000119780 471 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm15335-201ENSMUST00000122442 411 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm24419-201ENSMUST00000157875 332 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm25982-201ENSMUST00000157920 101 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm5456-201ENSMUST00000170706 844 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm3585-201ENSMUST00000173438 875 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm20691-201ENSMUST00000176889 333 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm17045-201ENSMUST00000178600 844 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm25314-201ENSMUST00000178810 79 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm7745-201ENSMUST00000182235 973 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Mir6337-201ENSMUST00000184194 105 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Mir6481-201ENSMUST00000184617 110 ntBASIC5.96□□□□□ -1.46
Trim39Q9ESN2 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms