Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm25093-201ENSMUST00000103993 132 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm6923-201ENSMUST00000118343 406 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm12340-201ENSMUST00000121617 462 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm3242-201ENSMUST00000171273 485 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm28412-201ENSMUST00000187243 177 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm43048-201ENSMUST00000196101 388 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm44361-201ENSMUST00000197960 94 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm43243-201ENSMUST00000199964 278 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm44539-201ENSMUST00000206010 238 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm44896-201ENSMUST00000206190 772 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm5649-201ENSMUST00000217918 951 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 AC160863.1-201ENSMUST00000218412 317 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 AC154640.2-201ENSMUST00000226324 472 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm15732-201ENSMUST00000079794 480 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim13Q9CYB0 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm12842-201ENSMUST00000117298 476 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm14998-201ENSMUST00000120502 495 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm4886-201ENSMUST00000121874 1176 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm8648-201ENSMUST00000122457 221 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm25435-201ENSMUST00000158277 267 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm25898-201ENSMUST00000158303 106 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Mir5128-201ENSMUST00000175217 84 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm27193-201ENSMUST00000184217 586 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm42437-201ENSMUST00000197263 923 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm44463-201ENSMUST00000198895 137 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm17991-201ENSMUST00000208139 297 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm45375-201ENSMUST00000210338 280 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm45814-201ENSMUST00000212646 775 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm18586-201ENSMUST00000217265 518 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 AC115878.1-201ENSMUST00000227247 334 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 AC117588.2-201ENSMUST00000228340 311 ntBASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Trim13Q9CYB0 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms