Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm37164-201ENSMUST00000192809 637 ntBASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Gm38138-201ENSMUST00000193274 696 ntBASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Gm5842-201ENSMUST00000195073 622 ntBASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Gm19649-201ENSMUST00000201126 822 ntBASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Gm18007-201ENSMUST00000205019 844 ntBASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 AC131677.1-201ENSMUST00000218721 535 ntBASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Gm10264-201ENSMUST00000220589 429 ntBASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 AC154598.1-201ENSMUST00000227079 347 ntBASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Gm5518-201ENSMUST00000084171 648 ntBASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx6-1Q99MA9 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm6744-201ENSMUST00000119303 543 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm13009-201ENSMUST00000121307 267 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm22492-201ENSMUST00000157192 297 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm26106-201ENSMUST00000157254 228 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Fth-ps2-201ENSMUST00000168364 516 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm26092-201ENSMUST00000179798 97 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Mir669a-1-201ENSMUST00000180238 97 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm27004-201ENSMUST00000183300 727 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Mir7093-201ENSMUST00000184195 101 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm43856-201ENSMUST00000197004 369 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm43712-201ENSMUST00000198020 291 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm8039-201ENSMUST00000204758 712 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm18601-201ENSMUST00000220831 634 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 AC134468.2-201ENSMUST00000222549 672 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm7099-201ENSMUST00000080066 554 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm22265-201ENSMUST00000082947 116 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm45297-201ENSMUST00000209893 3483 ntBASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Nkx6-1Q99MA9 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Mir1188-201ENSMUST00000116756 120 ntBASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.66□□□□□ -1.5
Nkx6-1Q99MA9 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms