Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm24035-201ENSMUST00000082867 107 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm45322-201ENSMUST00000211642 1361 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm37814-201ENSMUST00000195820 3644 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Mir669o-201ENSMUST00000103898 96 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm24117-201ENSMUST00000103973 133 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm24170-201ENSMUST00000104124 133 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm14610-201ENSMUST00000118358 966 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm14560-201ENSMUST00000118672 375 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm13503-201ENSMUST00000119017 446 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm11366-201ENSMUST00000119279 429 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm14989-201ENSMUST00000120497 207 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm11385-201ENSMUST00000121513 570 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm15022-201ENSMUST00000122074 746 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm14122-201ENSMUST00000122076 973 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm24949-201ENSMUST00000183609 215 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm37996-201ENSMUST00000191859 367 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm37173-201ENSMUST00000194498 1017 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm6064-201ENSMUST00000203999 454 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm3912-203ENSMUST00000211024 367 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 CT573422.1-201ENSMUST00000216655 405 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.92□□□□□ -1.46
Vps53Q8CCB4 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Vps53Q8CCB4 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm15159-201ENSMUST00000117062 764 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm11912-201ENSMUST00000117235 264 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm11484-201ENSMUST00000119808 338 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm13367-201ENSMUST00000119955 796 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm7973-201ENSMUST00000122107 488 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm25176-201ENSMUST00000122640 125 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm18560-201ENSMUST00000173463 1123 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm28356-202ENSMUST00000187566 858 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm6057-201ENSMUST00000195927 314 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm42509-201ENSMUST00000197390 781 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm42625-201ENSMUST00000198611 922 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm45032-201ENSMUST00000205375 520 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm44681-201ENSMUST00000208447 842 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm17999-201ENSMUST00000211568 542 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Vps53Q8CCB4 Gm22043-201ENSMUST00000082993 158 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms