Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC7.87□□□□□ -1.15
Trim35Q8C006 Gm45712-201ENSMUST00000212417 335 ntBASIC7.87□□□□□ -1.15
Trim35Q8C006 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC7.87□□□□□ -1.15
Trim35Q8C006 AC160931.2-201ENSMUST00000221445 351 ntBASIC7.87□□□□□ -1.15
Trim35Q8C006 AC121942.2-201ENSMUST00000223824 600 ntBASIC7.87□□□□□ -1.15
Trim35Q8C006 AC166830.2-201ENSMUST00000225821 196 ntBASIC7.87□□□□□ -1.15
Trim35Q8C006 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim35Q8C006 Olfr901-201ENSMUST00000063716 936 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim35Q8C006 Gm22251-201ENSMUST00000083216 107 ntBASIC7.87□□□□□ -1.15
Trim35Q8C006 Mir185-201ENSMUST00000083530 65 ntBASIC7.87□□□□□ -1.15
Trim35Q8C006 Gm5614-201ENSMUST00000091097 318 ntBASIC7.87□□□□□ -1.15
Trim35Q8C006 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim35Q8C006 Gm42656-201ENSMUST00000201506 2305 ntBASIC7.87□□□□□ -1.15
Trim35Q8C006 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Trim35Q8C006 Gm17137-201ENSMUST00000164106 4371 ntBASIC7.87□□□□□ -1.15
Trim35Q8C006 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim35Q8C006 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim35Q8C006 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim35Q8C006 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Trim35Q8C006 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim35Q8C006 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim35Q8C006 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Trim35Q8C006 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim35Q8C006 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim35Q8C006 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim35Q8C006 Gm37151-201ENSMUST00000194631 5007 ntBASIC7.87□□□□□ -1.15
Trim35Q8C006 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim35Q8C006 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim35Q8C006 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm45555-201ENSMUST00000210028 2602 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim35Q8C006 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC7.86□□□□□ -1.15
Trim35Q8C006 AC165260.6-202ENSMUST00000224959 1958 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim35Q8C006 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim35Q8C006 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim35Q8C006 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim35Q8C006 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim35Q8C006 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Trim35Q8C006 Il1bos-202ENSMUST00000156601 2425 ntTSL 2 BASIC7.86□□□□□ -1.15
Trim35Q8C006 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim35Q8C006 Mir1193-201ENSMUST00000116761 121 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm11997-201ENSMUST00000118697 313 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm14450-201ENSMUST00000119984 240 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm13435-201ENSMUST00000120111 1023 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm11369-201ENSMUST00000120812 318 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm12399-201ENSMUST00000121475 446 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm13214-201ENSMUST00000122137 408 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm26104-201ENSMUST00000157250 108 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm22699-201ENSMUST00000175376 105 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm10182-201ENSMUST00000178676 273 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm25947-201ENSMUST00000180343 110 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Mir7115-201ENSMUST00000184275 64 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm43048-201ENSMUST00000196101 388 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm8489-201ENSMUST00000209876 1152 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Rab3b-201ENSMUST00000003502 1053 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim35Q8C006 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Trim35Q8C006 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Trim35Q8C006 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm43682-201ENSMUST00000202150 2090 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim35Q8C006 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim35Q8C006 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
Trim35Q8C006 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim35Q8C006 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim35Q8C006 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
Trim35Q8C006 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim35Q8C006 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm17841-201ENSMUST00000210711 2425 ntBASIC7.86□□□□□ -1.15
Trim35Q8C006 Gm44046-201ENSMUST00000203145 2678 ntBASIC7.85□□□□□ -1.15
Trim35Q8C006 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim35Q8C006 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim35Q8C006 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC7.85□□□□□ -1.15
Trim35Q8C006 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim35Q8C006 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC7.85□□□□□ -1.15
Trim35Q8C006 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim35Q8C006 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Trim35Q8C006 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
Trim35Q8C006 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
Trim35Q8C006 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim35Q8C006 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim35Q8C006 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Trim35Q8C006 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim35Q8C006 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim35Q8C006 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC7.85□□□□□ -1.15
Trim35Q8C006 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim35Q8C006 Mir701-201ENSMUST00000102208 109 ntBASIC7.85□□□□□ -1.15
Trim35Q8C006 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Trim35Q8C006 Gm24257-201ENSMUST00000104472 131 ntBASIC7.85□□□□□ -1.15
Trim35Q8C006 Gm11204-201ENSMUST00000122438 147 ntBASIC7.85□□□□□ -1.15
Trim35Q8C006 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC7.85□□□□□ -1.15
Trim35Q8C006 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim35Q8C006 Gm26149-201ENSMUST00000157432 108 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms