Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Cdx1P18111 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC3.97□□□□□ -1.77
Cdx1P18111 Gm13491-201ENSMUST00000118267 235 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Gm11774-201ENSMUST00000118601 293 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Cdx1P18111 Gm4910-201ENSMUST00000119605 366 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Gm14175-201ENSMUST00000119835 241 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Gm6373-201ENSMUST00000121026 360 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC3.97□□□□□ -1.77
Cdx1P18111 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC3.97□□□□□ -1.77
Cdx1P18111 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC3.97□□□□□ -1.77
Cdx1P18111 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.97□□□□□ -1.77
Cdx1P18111 Gm15790-201ENSMUST00000161109 1251 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Cdx1P18111 Gm17159-201ENSMUST00000169043 482 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Gm27754-201ENSMUST00000183340 126 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Mir7028-201ENSMUST00000185016 64 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Gm27427-201ENSMUST00000185134 193 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
Cdx1P18111 Gm28596-201ENSMUST00000185870 696 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Gm28263-201ENSMUST00000185884 400 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Gm32295-201ENSMUST00000192558 696 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Gm31260-201ENSMUST00000193478 696 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Gm38234-201ENSMUST00000195204 421 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Gm43005-201ENSMUST00000199015 648 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Gm8748-201ENSMUST00000211125 587 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC3.97□□□□□ -1.77
Cdx1P18111 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC3.97□□□□□ -1.77
Cdx1P18111 AC162467.1-201ENSMUST00000220254 621 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC3.97□□□□□ -1.77
Cdx1P18111 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC3.97□□□□□ -1.77
Cdx1P18111 Gm19189-201ENSMUST00000221689 754 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 AC164424.1-201ENSMUST00000221690 170 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC3.97□□□□□ -1.77
Cdx1P18111 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
Cdx1P18111 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Cdx1P18111 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Cdx1P18111 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Cdx1P18111 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Cdx1P18111 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC3.97□□□□□ -1.77
Cdx1P18111 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Cdx1P18111 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Cdx1P18111 Gm11743-201ENSMUST00000117385 1735 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Cdx1P18111 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC3.97□□□□□ -1.77
Cdx1P18111 Gm38020-201ENSMUST00000193066 4676 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Cdx1P18111 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Cdx1P18111 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
Cdx1P18111 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
Cdx1P18111 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Cdx1P18111 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Cdx1P18111 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.96□□□□□ -1.77
Cdx1P18111 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.96□□□□□ -1.77
Cdx1P18111 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC3.96□□□□□ -1.77
Cdx1P18111 Gm29293-201ENSMUST00000189416 2188 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm18163-201ENSMUST00000197877 1643 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm37767-201ENSMUST00000193239 1834 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm43654-201ENSMUST00000200664 3417 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm45235-201ENSMUST00000208016 4465 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm6754-201ENSMUST00000117124 913 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm14575-201ENSMUST00000117210 560 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm16089-201ENSMUST00000117679 336 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm12317-201ENSMUST00000122307 319 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm25293-201ENSMUST00000122792 285 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm5924-201ENSMUST00000132554 871 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm25432-201ENSMUST00000158284 66 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm26404-201ENSMUST00000158498 109 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm15795-201ENSMUST00000160969 553 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm8224-201ENSMUST00000166178 497 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Cdx1P18111 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Rab26os-201ENSMUST00000176215 477 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Cdx1P18111 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28604-201ENSMUST00000186629 484 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28566-201ENSMUST00000186714 484 ntBASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx1P18111 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms