Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col1a1P11087 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col1a1P11087 Gm7452-202ENSMUST00000202891 3039 ntBASIC5.22□□□□□ -1.57
Col1a1P11087 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col1a1P11087 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col1a1P11087 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col1a1P11087 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
Col1a1P11087 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Col1a1P11087 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC5.21□□□□□ -1.58
Col1a1P11087 Gm11406-201ENSMUST00000117418 484 ntBASIC5.21□□□□□ -1.58
Col1a1P11087 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col1a1P11087 Gm22792-201ENSMUST00000157225 133 ntBASIC5.21□□□□□ -1.58
Col1a1P11087 Gm23781-201ENSMUST00000157940 308 ntBASIC5.21□□□□□ -1.58
Col1a1P11087 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col1a1P11087 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.21□□□□□ -1.58
Col1a1P11087 Gm17046-201ENSMUST00000168078 850 ntBASIC5.21□□□□□ -1.58
Col1a1P11087 Mir5106-201ENSMUST00000174936 73 ntBASIC5.21□□□□□ -1.58
Col1a1P11087 Mir6345-201ENSMUST00000184286 128 ntBASIC5.21□□□□□ -1.58
Col1a1P11087 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col1a1P11087 Gm9245-201ENSMUST00000200528 983 ntBASIC5.21□□□□□ -1.58
Col1a1P11087 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.21□□□□□ -1.58
Col1a1P11087 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.21□□□□□ -1.58
Col1a1P11087 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Col1a1P11087 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC5.21□□□□□ -1.58
Col1a1P11087 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col1a1P11087 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.21□□□□□ -1.58
Col1a1P11087 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col1a1P11087 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col1a1P11087 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Col1a1P11087 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col1a1P11087 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Col1a1P11087 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Col1a1P11087 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col1a1P11087 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col1a1P11087 Gm12062-201ENSMUST00000117533 259 ntBASIC5.2□□□□□ -1.58
Col1a1P11087 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC5.2□□□□□ -1.58
Col1a1P11087 Gm15916-201ENSMUST00000118355 736 ntBASIC5.2□□□□□ -1.58
Col1a1P11087 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC5.2□□□□□ -1.58
Col1a1P11087 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col1a1P11087 Gm18547-201ENSMUST00000192439 811 ntBASIC5.2□□□□□ -1.58
Col1a1P11087 Gm44583-201ENSMUST00000207478 281 ntBASIC5.2□□□□□ -1.58
Col1a1P11087 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col1a1P11087 Gm43327-201ENSMUST00000199285 4055 ntBASIC5.2□□□□□ -1.58
Col1a1P11087 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col1a1P11087 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col1a1P11087 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.2□□□□□ -1.58
Col1a1P11087 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col1a1P11087 CT025675.1-201ENSMUST00000228171 1567 ntBASIC5.2□□□□□ -1.58
Col1a1P11087 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.2□□□□□ -1.58
Col1a1P11087 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col1a1P11087 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col1a1P11087 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col1a1P11087 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Col1a1P11087 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col1a1P11087 Gm13311-201ENSMUST00000117863 379 ntBASIC5.2□□□□□ -1.58
Col1a1P11087 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.2□□□□□ -1.58
Col1a1P11087 Gm13092-201ENSMUST00000136346 260 ntBASIC5.2□□□□□ -1.58
Col1a1P11087 Gm25908-201ENSMUST00000157624 98 ntBASIC5.2□□□□□ -1.58
Col1a1P11087 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.2□□□□□ -1.58
Col1a1P11087 Gm27899-201ENSMUST00000184715 64 ntBASIC5.2□□□□□ -1.58
Col1a1P11087 Gm43853-201ENSMUST00000197162 301 ntBASIC5.2□□□□□ -1.58
Col1a1P11087 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC5.2□□□□□ -1.58
Col1a1P11087 Gm44032-201ENSMUST00000204841 166 ntBASIC5.2□□□□□ -1.58
Col1a1P11087 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.2□□□□□ -1.58
Col1a1P11087 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.2□□□□□ -1.58
Col1a1P11087 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Col1a1P11087 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col1a1P11087 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC5.19□□□□□ -1.58
Col1a1P11087 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Col1a1P11087 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Col1a1P11087 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.19□□□□□ -1.58
Col1a1P11087 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col1a1P11087 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col1a1P11087 Mir879-201ENSMUST00000104703 76 ntBASIC5.19□□□□□ -1.58
Col1a1P11087 Gm15364-201ENSMUST00000119618 585 ntBASIC5.19□□□□□ -1.58
Col1a1P11087 Gm24998-201ENSMUST00000157908 89 ntBASIC5.19□□□□□ -1.58
Col1a1P11087 Gm23782-201ENSMUST00000157939 120 ntBASIC5.19□□□□□ -1.58
Col1a1P11087 Gm6214-201ENSMUST00000178845 541 ntBASIC5.19□□□□□ -1.58
Col1a1P11087 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.19□□□□□ -1.58
Col1a1P11087 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col1a1P11087 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col1a1P11087 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col1a1P11087 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col1a1P11087 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col1a1P11087 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
Col1a1P11087 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col1a1P11087 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Col1a1P11087 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Col1a1P11087 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.18□□□□□ -1.58
Col1a1P11087 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col1a1P11087 Gm10552-201ENSMUST00000113396 372 ntBASIC5.18□□□□□ -1.58
Col1a1P11087 Gm14619-201ENSMUST00000120480 168 ntBASIC5.18□□□□□ -1.58
Col1a1P11087 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC5.18□□□□□ -1.58
Col1a1P11087 Gm25104-201ENSMUST00000122476 163 ntBASIC5.18□□□□□ -1.58
Col1a1P11087 Gm23098-201ENSMUST00000157552 299 ntBASIC5.18□□□□□ -1.58
Col1a1P11087 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col1a1P11087 Gm27773-201ENSMUST00000184087 78 ntBASIC5.18□□□□□ -1.58
Col1a1P11087 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col1a1P11087 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC5.18□□□□□ -1.58
Col1a1P11087 Gm4248-201ENSMUST00000196905 316 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms