Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Gm11833-201ENSMUST00000118393 853 ntBASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Gm37056-201ENSMUST00000192141 1865 ntBASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Gm43606-201ENSMUST00000195938 3556 ntBASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Gm13076-201ENSMUST00000118041 204 ntBASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Gm11699-201ENSMUST00000119016 401 ntBASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Gm26045-201ENSMUST00000157862 97 ntBASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Mir3092-201ENSMUST00000174954 96 ntBASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Gm43436-201ENSMUST00000199308 147 ntBASIC4.33□□□□□ -1.72
Col6a3E9PWQ3 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Gm45112-201ENSMUST00000208576 5125 ntBASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Gm14101-201ENSMUST00000121502 473 ntBASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Gm22023-201ENSMUST00000104354 130 ntBASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Gm23319-201ENSMUST00000104467 131 ntBASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Gm28389-201ENSMUST00000190090 697 ntBASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Gm36776-201ENSMUST00000207006 203 ntBASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Gm44879-201ENSMUST00000207007 503 ntBASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 AC158981.3-201ENSMUST00000226844 1024 ntBASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a3E9PWQ3 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Gm15060-201ENSMUST00000119550 948 ntBASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Gm26036-201ENSMUST00000158149 144 ntBASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 AC164597.2-201ENSMUST00000226738 603 ntBASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Gm24817-201ENSMUST00000093672 105 ntBASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Gm43462-201ENSMUST00000200265 3648 ntBASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Gm12885-201ENSMUST00000122246 328 ntBASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col6a3E9PWQ3 Gm38146-201ENSMUST00000194121 1293 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms