Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm29793-201ENSMUST00000202874 460 ntBASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm43580-201ENSMUST00000202892 284 ntBASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm44252-201ENSMUST00000204187 330 ntBASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm19908-201ENSMUST00000204684 391 ntBASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm30646-201ENSMUST00000207662 180 ntBASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 AC166263.1-201ENSMUST00000218586 238 ntBASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm4803-201ENSMUST00000218729 1279 ntBASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 AC154562.1-201ENSMUST00000226140 966 ntBASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 AC154838.2-201ENSMUST00000226602 747 ntBASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm23300-201ENSMUST00000082712 125 ntBASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm43594-201ENSMUST00000201153 3442 ntBASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.35□□□□□ -1.87
Trav16d-dv11A0A075B617 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm22592-201ENSMUST00000104242 131 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm14714-201ENSMUST00000119743 439 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm12074-201ENSMUST00000120189 219 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm5391-201ENSMUST00000121155 613 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm12833-201ENSMUST00000136112 477 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm22588-201ENSMUST00000157510 140 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm23781-201ENSMUST00000157940 308 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm2389-201ENSMUST00000160487 189 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm17081-201ENSMUST00000167363 478 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm28625-201ENSMUST00000188309 205 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm18445-201ENSMUST00000195502 774 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm5660-201ENSMUST00000197453 1149 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 AC123064.1-201ENSMUST00000218950 406 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Mir28a-201ENSMUST00000083560 86 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 AC158388.2-201ENSMUST00000223665 1314 ntBASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Trav16d-dv11A0A075B617 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Trav16d-dv11A0A075B617 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Trav16d-dv11A0A075B617 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Trav16d-dv11A0A075B617 Gm42946-201ENSMUST00000196108 2570 ntBASIC3.34□□□□□ -1.88
Trav16d-dv11A0A075B617 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Trav16d-dv11A0A075B617 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
Trav16d-dv11A0A075B617 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.34□□□□□ -1.88
Trav16d-dv11A0A075B617 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.33□□□□□ -1.88
Trav16d-dv11A0A075B617 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trav16d-dv11A0A075B617 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Trav16d-dv11A0A075B617 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trav16d-dv11A0A075B617 Gm42680-201ENSMUST00000196238 2500 ntBASIC3.33□□□□□ -1.88
Trav16d-dv11A0A075B617 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trav16d-dv11A0A075B617 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Trav16d-dv11A0A075B617 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Trav16d-dv11A0A075B617 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.33□□□□□ -1.88
Trav16d-dv11A0A075B617 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trav16d-dv11A0A075B617 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC3.33□□□□□ -1.88
Trav16d-dv11A0A075B617 Gm8475-201ENSMUST00000118211 526 ntBASIC3.33□□□□□ -1.88
Trav16d-dv11A0A075B617 Gm12387-201ENSMUST00000118573 955 ntBASIC3.33□□□□□ -1.88
Trav16d-dv11A0A075B617 Mup-ps21-201ENSMUST00000119998 448 ntBASIC3.33□□□□□ -1.88
Trav16d-dv11A0A075B617 Gm6305-201ENSMUST00000121027 1012 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 193.7 ms