Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Mir292-201ENSMUST00000104847 82 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm16128-201ENSMUST00000117855 626 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm16383-201ENSMUST00000118122 232 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm14463-201ENSMUST00000121117 498 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm23855-201ENSMUST00000158377 135 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm23773-201ENSMUST00000158985 296 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm27551-201ENSMUST00000184258 77 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Mir6926-201ENSMUST00000184562 68 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm38166-201ENSMUST00000191660 471 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm36974-201ENSMUST00000194200 1071 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm6321-201ENSMUST00000194460 1090 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm43476-201ENSMUST00000197873 405 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm43408-201ENSMUST00000198263 440 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm19936-201ENSMUST00000216414 838 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 AC153516.1-201ENSMUST00000217955 779 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 AC107663.3-201ENSMUST00000225873 601 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm6863-201ENSMUST00000052882 636 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm25147-201ENSMUST00000083030 105 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Mir20a-201ENSMUST00000083508 107 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Gm37569-201ENSMUST00000192111 1722 ntBASIC5.94□□□□□ -1.46
Vps53Q8CCB4 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm12096-201ENSMUST00000121149 829 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm22725-201ENSMUST00000158092 110 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm27266-201ENSMUST00000184521 123 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Mir6943-201ENSMUST00000185186 66 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm20203-201ENSMUST00000192352 332 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm38334-201ENSMUST00000195060 313 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm42663-201ENSMUST00000199883 351 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Vps53Q8CCB4 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.93□□□□□ -1.46
Vps53Q8CCB4 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms