Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 AC141425.1-201ENSMUST00000224989 265 ntBASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Gm38105-201ENSMUST00000192112 2621 ntBASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Gm15364-201ENSMUST00000119618 585 ntBASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Gm9003-201ENSMUST00000121810 482 ntBASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Gm26036-201ENSMUST00000158149 144 ntBASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Gm25264-201ENSMUST00000158519 117 ntBASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Gm28389-201ENSMUST00000190090 697 ntBASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Gm37682-201ENSMUST00000191776 522 ntBASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Gm45523-201ENSMUST00000210712 799 ntBASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Gm37180-201ENSMUST00000195335 2819 ntBASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Gm25595-201ENSMUST00000102273 97 ntBASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Gm24788-201ENSMUST00000104283 156 ntBASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Gm25817-201ENSMUST00000177758 121 ntBASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Gm24766-201ENSMUST00000179182 121 ntBASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 CT009734.1-201ENSMUST00000227657 1687 ntBASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Col6a6Q8C6K9 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm5379-201ENSMUST00000120973 826 ntBASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm25908-201ENSMUST00000157624 98 ntBASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm17149-201ENSMUST00000164712 375 ntBASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Mir3471-2-201ENSMUST00000174896 102 ntBASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm29031-201ENSMUST00000185316 614 ntBASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm29000-201ENSMUST00000185444 614 ntBASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm28204-201ENSMUST00000185934 614 ntBASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm28290-201ENSMUST00000186505 614 ntBASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm28161-201ENSMUST00000186669 614 ntBASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm28749-209ENSMUST00000189599 614 ntBASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm37828-201ENSMUST00000192496 432 ntBASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm33163-201ENSMUST00000194504 614 ntBASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 AC154296.3-201ENSMUST00000214427 712 ntBASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Snora7a-201ENSMUST00000082629 140 ntBASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm42729-201ENSMUST00000201770 2930 ntBASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Gm26996-201ENSMUST00000204418 1359 ntBASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col6a6Q8C6K9 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms